FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BURP1 (3-demethylubiquinone-9 3-methyltransferase OS=Burkholderia pseudomallei (strain 1710b) GN=ubiG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.302e-19
Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 2
Query:   38 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E   +D V   E++EHV  PA    + + L    G    ST+NR++++Y  A+I AE+I   LPKGTH ++ F+ P EL   ++ A + + E+ G  Y+PL  R++LS+D  VN++
Sbjct:  110 EPGAYDVVTCMEMLEHVPSPANIVAACATLVKPGGWVFFSTLNRNLKSYLLAVIGAEYIAQMLPKGTHDYARFIRPSELARFVREAGLQMVEIKGIAYHPLAKRFALSNDTDVNYL 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BURMA (3-demethylubiquinone-9 3-methyltransferase OS=Burkholderia mallei GN=ubiG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.302e-19
Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 2
Query:   38 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E   +D V   E++EHV  PA    + + L    G    ST+NR++++Y  A+I AE+I   LPKGTH ++ F+ P EL   ++ A + + E+ G  Y+PL  R++LS+D  VN++
Sbjct:  110 EPGAYDVVTCMEMLEHVPSPANIVAACATLVKPGGWVFFSTLNRNLKSYLLAVIGAEYIAQMLPKGTHDYARFIRPSELARFVREAGLQMVEIKGIAYHPLAKRFALSNDTDVNYL 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_IDILO (3-demethylubiquinone-9 3-methyltransferase OS=Idiomarina loihiensis GN=ubiG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.618e-19
Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L ++Q   FD V   E++EHV DP    K+ +      G    ST+NR+V+++   I+AAEH+L W+PKGTHQ   F+ P EL+ +   A+++   + G ++NPL G      D+ VN+I
Sbjct:  114 ETLADQQPASFDVVTCLEMLEHVPDPKAIVKACAKALKPGGKIFFSTLNRNVKSWLLGIVAAEHVLGWVPKGTHQHQRFIKPSELLRMTDAAALEDIAINGLIFNPLKGFVLSEKDVDVNYI 235          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_COLP3 (3-demethylubiquinone-9 3-methyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=ubiG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.618e-19
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            EK +E    FD V   E++EHV DPA   ++ S L    G    ST+N+S+++Y  AI+AAE +L  +P GTH    F+ P +L+   +   +   + +G  YNP+TG   L+D + VN+I
Sbjct:  120 EKALENPGTFDVVTCMEMLEHVPDPASVIQACSTLVKPGGLIFFSTLNKSIKSYLLAILAAEKLLKIVPDGTHDHDKFIRPSQLIGWAEEHGLKCIDASGIHYNPITGNHKLNDSLDVNYI 240          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BURTA (3-demethylubiquinone-9 3-methyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ubiG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.337e-19
Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 2
Query:   38 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E   +D V   E++EHV  PA    + + L    G    ST+NR++++Y  A+I AE+I   LPKGTH ++ F+ P EL   ++ A + + E+ G  Y+PL  R++LS+D  VN++
Sbjct:  110 EPGAYDVVTCMEMLEHVPSPANIVAACATLVKPGGWVFFSTLNRNLKSYLLAVIGAEYIAQMLPKGTHDYARFIRPSELAHFVRAAGLQLVEIKGITYHPLAKRFALSNDTDVNYL 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XYLFT (3-demethylubiquinone-9 3-methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ubiG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.252e-18
Identity = 43/120 (35.83%), Postives = 71/120 (59.17%), Query Frame = 2
Query:   29 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            L E+   FDA+   E++EHV DPA    + + L    G   +STINR++ A+  A++ AE+++  LPKGTHQ+  F+ P EL   L+ A + +++++G  Y P   R  L+    +N++A
Sbjct:  115 LAEQPAPFDAIACMEMLEHVPDPAAIVDACAHLLKPGGRLFVSTINRTLAAFMLAVVGAEYVVRLLPKGTHQYKDFIRPAELAAWLRHAGLHLEDVSGMRYEPWRNRARLTARTDINYLA 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XYLFM (3-demethylubiquinone-9 3-methyltransferase OS=Xylella fastidiosa (strain M12) GN=ubiG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.252e-18
Identity = 43/120 (35.83%), Postives = 71/120 (59.17%), Query Frame = 2
Query:   29 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            L E+   FDA+   E++EHV DPA    + + L    G   +STINR++ A+  A++ AE+++  LPKGTHQ+  F+ P EL   L+ A + +++++G  Y P   R  L+    +N++A
Sbjct:  115 LAEQPAPFDAIACMEMLEHVPDPAAIVDACAHLLKPGGRLFVSTINRTLAAFMLAVVGAEYVVRLLPKGTHQYKDFIRPAELAAWLRHAGLHLEDVSGMRYEPWRNRARLTARTDINYLA 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XYLF2 (3-demethylubiquinone-9 3-methyltransferase OS=Xylella fastidiosa (strain M23) GN=ubiG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.252e-18
Identity = 43/120 (35.83%), Postives = 71/120 (59.17%), Query Frame = 2
Query:   29 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            L E+   FDA+   E++EHV DPA    + + L    G   +STINR++ A+  A++ AE+++  LPKGTHQ+  F+ P EL   L+ A + +++++G  Y P   R  L+    +N++A
Sbjct:  115 LAEQPAPFDAIACMEMLEHVPDPAAIVDACAHLLKPGGRLFVSTINRTLAAFMLAVVGAEYVVRLLPKGTHQYKDFIRPAELAAWLRHAGLHLEDVSGMRYEPWRNRARLTARTDINYLA 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_AZOVD (3-demethylubiquinone-9 3-methyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ubiG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.252e-18
Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 2
Query:   47 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            +FD V   E++EHV DPA    +   L    G    STINR+ +AY  AII AE++L  LP+GTH +  F+ P EL    + + + + ++ G  YNPLT  + L  D+ VN++
Sbjct:  113 RFDVVTCLEMLEHVPDPASVIHACHTLVKPGGQVFFSTINRNPKAYLLAIIGAEYLLKLLPRGTHDFRKFIRPSELGAWCRASGLAIGDIVGLTYNPLTRHYKLGTDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_AZOSB (3-demethylubiquinone-9 3-methyltransferase OS=Azoarcus sp. (strain BH72) GN=ubiG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.252e-18
Identity = 41/118 (34.75%), Postives = 71/118 (60.17%), Query Frame = 2
Query:   47 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            +FD V   E++EHV +P     + + +    GA   ST+NR+ +AY  A++ AE++L+ LP+GTH ++ F+ P EL    + A +++  ++G  YNP+T  ++LS D  VN++    K
Sbjct:  114 QFDVVTCMEMLEHVPNPESTVHACAQMAKPGGAVFFSTLNRNFKAYLFAVVGAEYLLNLLPRGTHDYAKFIKPSELSRYCRNAGLELVSLSGMTYNPITKVYALSRDTDVNYMVHARK 231          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_BURP14.302e-1937.073-demethylubiquinone-9 3-methyltransferase OS=Burk... [more]
UBIG_BURMA4.302e-1937.073-demethylubiquinone-9 3-methyltransferase OS=Burk... [more]
UBIG_IDILO5.618e-1937.703-demethylubiquinone-9 3-methyltransferase OS=Idio... [more]
UBIG_COLP35.618e-1937.193-demethylubiquinone-9 3-methyltransferase OS=Colw... [more]
UBIG_BURTA7.337e-1937.073-demethylubiquinone-9 3-methyltransferase OS=Burk... [more]
UBIG_XYLFT1.252e-1835.833-demethylubiquinone-9 3-methyltransferase OS=Xyle... [more]
UBIG_XYLFM1.252e-1835.833-demethylubiquinone-9 3-methyltransferase OS=Xyle... [more]
UBIG_XYLF21.252e-1835.833-demethylubiquinone-9 3-methyltransferase OS=Xyle... [more]
UBIG_AZOVD1.252e-1838.943-demethylubiquinone-9 3-methyltransferase OS=Azot... [more]
UBIG_AZOSB1.252e-1834.753-demethylubiquinone-9 3-methyltransferase OS=Azoa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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