FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_CAUCR (3-demethylubiquinone-9 3-methyltransferase OS=Caulobacter crescentus GN=ubiG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.094e-26
Identity = 56/125 (44.80%), Postives = 76/125 (60.80%), Query Frame = 2
Query:   29 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 403
            L E    FD V+  EVIEHVADP EF ++ + L    G   ++T+NR+++A A A I AE++L W+P GTH W  FL PEEL   L    + ++   G  YNPLTGRWS S D  +N++   TK+
Sbjct:  128 LAEGAGPFDVVLTMEVIEHVADPGEFLRTCAKLLKPGGIMFVATLNRTLKALALAKIGAEYVLRWVPPGTHDWKQFLKPEELRAFLAGEPVAMQGPFGVAYNPLTGRWSRSSDTDINYMMTVTKD 252          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_CAUCN (3-demethylubiquinone-9 3-methyltransferase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=ubiG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.094e-26
Identity = 56/125 (44.80%), Postives = 76/125 (60.80%), Query Frame = 2
Query:   29 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 403
            L E    FD V+  EVIEHVADP EF ++ + L    G   ++T+NR+++A A A I AE++L W+P GTH W  FL PEEL   L    + ++   G  YNPLTGRWS S D  +N++   TK+
Sbjct:  128 LAEGAGPFDVVLTMEVIEHVADPGEFLRTCAKLLKPGGIMFVATLNRTLKALALAKIGAEYVLRWVPPGTHDWKQFLKPEELRAFLAGEPVAMQGPFGVAYNPLTGRWSRSSDTDINYMMTVTKD 252          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRASO (3-demethylubiquinone-9 3-methyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=ubiG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.094e-26
Identity = 51/118 (43.22%), Postives = 79/118 (66.95%), Query Frame = 2
Query:   32 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            ++ + +FD V+A EV+EHV D   F    +A+    G  V+ST+NR+ +++A AI+ AE++L WLP+GTH+WS F+TP+EL   L    + + E +G VY+P   RWSLS D+ VN++
Sbjct:  129 MDPRERFDIVLAMEVVEHVTDVGAFLGRCAAVLKPGGLMVVSTLNRNWKSFALAIVGAEYVLRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSSDMDVNYM 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOS4 (3-demethylubiquinone-9 3-methyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=ubiG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.057e-25
Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAFGTKNS 406
            E L     +FD V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++A AI+ AE ++ WLPKGTH WS F+TP+EL  ++++A +D  +  G V+NP++  WSLS  D+SVN++    + S
Sbjct:  119 EALAAAGERFDVVLNMEVVEHVADPLTYLTACRELLKPGGLMICSTLNRNPKSFAMAIVGAEWVMRWLPKGTHDWSKFITPDELYDLIRKAGLDPVDRKGMVFNPVSWSWSLSARDLSVNYVTASVRRS 247          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOP2 (3-demethylubiquinone-9 3-methyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=ubiG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.057e-25
Identity = 53/122 (43.44%), Postives = 79/122 (64.75%), Query Frame = 2
Query:   20 TEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            T + ++ + +FD V+A EVIEHV D   F    +AL    G  V++T+NR+ +++A AI+ AE+++ WLP+GTHQW  F+TP EL   L    + V E +G V+NPL  RW LS D+ VN++
Sbjct:  125 TVEEIDPRERFDIVLAMEVIEHVTDVGAFLGRCAALMKPNGIMVVATLNRNWKSFALAIVGAEYVMRWLPRGTHQWDKFVTPAELEQHLHGFGMIVTEQSGLVFNPLADRWKLSADMDVNYM 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_NITWN (3-demethylubiquinone-9 3-methyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=ubiG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.057e-25
Identity = 50/118 (42.37%), Postives = 78/118 (66.10%), Query Frame = 2
Query:   32 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            ++ + +FD ++A EV+EHVAD   F    +A+    G    ST+NR+ +++A  I+AAE++L WLP+GTHQW  F+TP+EL    +R  + + E +G VY+P   RWSLS D+ VN++
Sbjct:  137 MDVRERFDIILAMEVVEHVADVGLFLDRCAAMLKPGGMMAASTLNRNWKSFALGIVAAEYVLRWLPRGTHQWDKFVTPDELARHFERNGLGITEQSGVVYSPFGDRWSLSSDMDVNYM 254          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOS1 (3-demethylubiquinone-9 3-methyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=ubiG PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25
Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAFGTKNS 406
            E L     +FD V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++A AI+ AE ++ WLPKGTH WS F+TP+EL  ++++A +D  +  G V+NP++  WSLS  D+SVN++    + +
Sbjct:  119 EALAAAGERFDVVLNMEVVEHVADPLAYLTACRELLKPGGLMICSTLNRNPKSFAMAIVGAEWVMRWLPKGTHDWSKFITPDELYDLIRKAGLDPVDRKGMVFNPVSWSWSLSTRDLSVNYVTASVRRT 247          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RICBR (3-demethylubiquinone-9 3-methyltransferase OS=Rickettsia bellii (strain RML369-C) GN=ubiG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.355e-25
Identity = 58/135 (42.96%), Postives = 85/135 (62.96%), Query Frame = 2
Query:    2 INIIPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAFGTKN 403
            +N +  T + +E  +++D VI  EVIEHV +  EF  +L      +G  +ISTINR+ +AY   IIAAE+IL W+PK TH +S FL P E+  +L+  +I+++E+ G VYN    +W LS DDI VN+  +  KN
Sbjct:  101 VNYLKSTIEELENDKQYDVVICLEVIEHVENVQEFMLNLVKRIKPKGIAIISTINRTKKAYLLGIIAAEYILGWVPKNTHDYSKFLKPSEIYEMLENTNIEIEELKGLVYNMAEDKWVLSDDDIDVNYFVYLKKN 235          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RICB8 (3-demethylubiquinone-9 3-methyltransferase OS=Rickettsia bellii (strain OSU 85-389) GN=ubiG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.355e-25
Identity = 58/135 (42.96%), Postives = 85/135 (62.96%), Query Frame = 2
Query:    2 INIIPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAFGTKN 403
            +N +  T + +E  +++D VI  EVIEHV +  EF  +L      +G  +ISTINR+ +AY   IIAAE+IL W+PK TH +S FL P E+  +L+  +I+++E+ G VYN    +W LS DDI VN+  +  KN
Sbjct:  101 VNYLKSTIEELENDKQYDVVICLEVIEHVENVQEFMLNLVKRIKPKGIAIISTINRTKKAYLLGIIAAEYILGWVPKNTHDYSKFLKPSEIYEMLENTNIEIEELKGLVYNMAEDKWVLSDDDIDVNYFVYLKKN 235          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOSK (3-demethylubiquinone-9 3-methyltransferase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=ubiG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.355e-25
Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAFGTKNS 406
            E L     +FD V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++A AI+ AE ++ WLPKGTH WS F+TP+EL  ++++A +D  +  G V+NP++  WSLS  D+SVN++    + +
Sbjct:  119 EALAAAGERFDVVLNMEVVEHVADPLAYLTACRELLKPGGLMICSTLNRNPKSFAMAIVGAEWVMRWLPKGTHDWSKFITPDELYDLIRKAGLDPVDRKGMVFNPVSWSWSLSARDLSVNYVTASVRRT 247          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_CAUCR8.094e-2644.803-demethylubiquinone-9 3-methyltransferase OS=Caul... [more]
UBIG_CAUCN8.094e-2644.803-demethylubiquinone-9 3-methyltransferase OS=Caul... [more]
UBIG_BRASO8.094e-2643.223-demethylubiquinone-9 3-methyltransferase OS=Brad... [more]
UBIG_RHOS41.057e-2541.093-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]
UBIG_RHOP21.057e-2543.443-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]
UBIG_NITWN1.057e-2542.373-demethylubiquinone-9 3-methyltransferase OS=Nitr... [more]
UBIG_RHOS11.803e-2540.313-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]
UBIG_RICBR2.355e-2542.963-demethylubiquinone-9 3-methyltransferase OS=Rick... [more]
UBIG_RICB82.355e-2542.963-demethylubiquinone-9 3-methyltransferase OS=Rick... [more]
UBIG_RHOSK2.355e-2540.313-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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