FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_MAGSA (3-demethylubiquinone-9 3-methyltransferase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=ubiG PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.169e-24
Identity = 49/127 (38.58%), Postives = 80/127 (62.99%), Query Frame = 2
Query:   20 TEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            T + ++    FD V++ EV+EHV D + F    +A     G  + +T+NR+ +A+A A++ AE++L WLPKGTH W+ F+ P E   +L+   I V++MAG  +NPL+  W  +D++ VN++ FG K
Sbjct:  122 TPEQLDPNEAFDVVLSMEVVEHVPDVSAFLGHATARLKPGGVFMGATLNRTAKAWALAVVGAEYVLGWLPKGTHDWNKFVRPSEFAAMLRDRGITVRQMAGMAFNPLSDTWRETDNLDVNYMLFGVK 248          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RICCN (3-demethylubiquinone-9 3-methyltransferase OS=Rickettsia conorii GN=ubiG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.994e-24
Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = 2
Query:    2 INIIPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTKN 403
            IN +  T + ++  + +D VI  EVIEHV +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K+
Sbjct:  150 INYLQSTIEELDSDKLYDVVICLEVIEHVENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPLEIYEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRKS 284          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RICFE (3-demethylubiquinone-9 3-methyltransferase OS=Rickettsia felis GN=ubiG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.400e-24
Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 2
Query:    2 INIIPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTKNS 406
            +N +  T + ++  + +D VI  EVIEHV +  +F  +L       G  +ISTINR+ +AY   II AE++L W+PK TH +S FL P E+  +L    I++KE+ G VY+P    W LS+DI VN F+  G K +
Sbjct:  101 VNYLQSTIEELQSDKLYDVVICLEVIEHVENVQQFILNLVGHIKPNGMAIISTINRTKKAYVLGIIVAEYVLGWVPKNTHDYSKFLKPSEIYEMLTDTDIEIKELKGLVYDPAKNEWKLSNDIDVNYFMCLGRKTN 236          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_MESSB (3-demethylubiquinone-9 3-methyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=ubiG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.400e-24
Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L ++  KFD ++  EV+EHVAD   F +  + +    G   ++TINR+++A   AII AE++L WLP+GTHQ+   + P+EL   L  A +  K+  G VYNPLT RW+ S D+ VN++    K
Sbjct:  121 EALADQGEKFDIILNMEVVEHVADIDLFIEKCAEMLKPGGLMFVATINRTLKALGLAIIGAEYVLRWLPRGTHQYGKLVRPDELERALASAGLITKDRTGVVYNPLTDRWNRSRDMDVNYMVLAEK 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_HAEDU (3-demethylubiquinone-9 3-methyltransferase OS=Haemophilus ducreyi GN=ubiG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.800e-24
Identity = 51/114 (44.74%), Postives = 77/114 (67.54%), Query Frame = 2
Query:   47 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            KFD V   E++EHV DP    +S  AL   +G   +STINR+++AY   +I AE++L  LPKGTH++  F+ P EL+    +AS++ KEM G+ +NPLT ++ L++D+S N+IA
Sbjct:  118 KFDVVTCMEMLEHVPDPLSVIQSCKALLKPDGVLFLSTINRTLKAYMLVVIGAEYLLKMLPKGTHEFEKFIKPAELLTWCDQASLECKEMKGYHFNPLTEKFWLNNDVSCNYIA 231          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRUME (3-demethylubiquinone-9 3-methyltransferase OS=Brucella melitensis GN=ubiG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.800e-24
Identity = 51/127 (40.16%), Postives = 76/127 (59.84%), Query Frame = 2
Query:   20 TEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            TE L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII AE++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++    +
Sbjct:  120 TEALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGAEYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYMVLAER 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRUMB (3-demethylubiquinone-9 3-methyltransferase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ubiG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.800e-24
Identity = 51/127 (40.16%), Postives = 76/127 (59.84%), Query Frame = 2
Query:   20 TEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            TE L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII AE++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++    +
Sbjct:  120 TEALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGAEYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYMVLAER 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RICTY (3-demethylubiquinone-9 3-methyltransferase OS=Rickettsia typhi GN=ubiG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.575e-24
Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 2
Query:    2 INIIPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 391
            IN +  T + +E  + +D VI  EVIEHV +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P E+  IL   +I++KE+ G V+N     W LS+DI VN+  +
Sbjct:  101 INYLQTTIEELENDKLYDVVICLEVIEHVENVQQFILNLVQHIKPNGIAIISTINRTKKAYLFGIIVAEYILGWVPKNTHDYSKFLKPSEIYEILTDTNIEIKELKGLVFNLARNEWKLSNDIDVNYFMY 230          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_OCHA4 (3-demethylubiquinone-9 3-methyltransferase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ubiG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.688e-23
Identity = 52/126 (41.27%), Postives = 73/126 (57.94%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L E   KFD V+  EV+EHVAD   F  + S +    G   ++TINR+++AY  AII AE++L WLP+GTHQ+   + PEEL   L +  + + +  G  YNPL   WS S D  VN++    +
Sbjct:  121 EALAEAGEKFDVVLNMEVVEHVADVDLFMSATSEMVKPGGLMFVATINRTLKAYGLAIIGAEYVLRWLPRGTHQYEKLVRPEELEAALAKGGLRLIDKLGVTYNPLADSWSRSRDTDVNYMVLAER 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BARQU (3-demethylubiquinone-9 3-methyltransferase OS=Bartonella quintana GN=ubiG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.688e-23
Identity = 49/121 (40.50%), Postives = 77/121 (63.64%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L ++  KFD ++  EV+EHVAD   F  + + +  S+G   +ST+NR+ +A+  AI+ AE+IL WLPKGTH +  FL P+EL  +L + ++ V +  G  YNP+   W+ S D+ VN++
Sbjct:  121 EALADKGEKFDIILNMEVVEHVADVNLFIAATAKMLKSQGVMFVSTLNRTWKAWGLAIVGAEYILRWLPKGTHDYKKFLKPQELKNLLSKNALTVIDEIGITYNPVNDSWNRSKDMDVNYL 241          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_MAGSA1.169e-2438.583-demethylubiquinone-9 3-methyltransferase OS=Magn... [more]
UBIG_RICCN1.994e-2442.963-demethylubiquinone-9 3-methyltransferase OS=Rick... [more]
UBIG_RICFE3.400e-2440.443-demethylubiquinone-9 3-methyltransferase OS=Rick... [more]
UBIG_MESSB3.400e-2441.273-demethylubiquinone-9 3-methyltransferase OS=Meso... [more]
UBIG_HAEDU5.800e-2444.743-demethylubiquinone-9 3-methyltransferase OS=Haem... [more]
UBIG_BRUME5.800e-2440.163-demethylubiquinone-9 3-methyltransferase OS=Bruc... [more]
UBIG_BRUMB5.800e-2440.163-demethylubiquinone-9 3-methyltransferase OS=Bruc... [more]
UBIG_RICTY7.575e-2442.313-demethylubiquinone-9 3-methyltransferase OS=Rick... [more]
UBIG_OCHA41.688e-2341.273-demethylubiquinone-9 3-methyltransferase OS=Ochr... [more]
UBIG_BARQU1.688e-2340.503-demethylubiquinone-9 3-methyltransferase OS=Bart... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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