FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10140 contig Ccv1_Contig10140:1..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHIE6 (3-demethylubiquinone-9 3-methyltransferase OS=Rhizobium etli (strain CIAT 652) GN=ubiG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AAE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN++  G +
Sbjct:  121 EELAEAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEKPLAASGLEITDRTGVFFNPLSNQWNLSRDMDVNYMLLGKR 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRUSU (3-demethylubiquinone-9 3-methyltransferase OS=Brucella suis GN=ubiG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII AE++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++    +
Sbjct:  121 EALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGAEYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYMVLAER 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRUSI (3-demethylubiquinone-9 3-methyltransferase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ubiG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII AE++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++    +
Sbjct:  121 EALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGAEYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYMVLAER 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRUO2 (3-demethylubiquinone-9 3-methyltransferase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=ubiG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII AE++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++    +
Sbjct:  121 EALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGAEYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYMVLAER 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRUC2 (3-demethylubiquinone-9 3-methyltransferase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ubiG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII AE++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++    +
Sbjct:  121 EALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGAEYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYMVLAER 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRUA2 (3-demethylubiquinone-9 3-methyltransferase OS=Brucella abortus (strain 2308) GN=ubiG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII AE++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++    +
Sbjct:  121 EALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGAEYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYMVLAER 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRUA1 (3-demethylubiquinone-9 3-methyltransferase OS=Brucella abortus (strain S19) GN=ubiG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII AE++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++    +
Sbjct:  121 EALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGAEYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYMVLAER 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RICPR (3-demethylubiquinone-9 3-methyltransferase OS=Rickettsia prowazekii GN=ubiG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.879e-23
Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 2
Query:    2 INIIPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 382
            IN +  T + +E  + +D VI  EVIEHVA+  +F  +L       G  +IST+NR+ +AY   II AE+IL W+PK TH +S F+ P E+  IL   +I++KE+ G V+N     W LS+DI VN+
Sbjct:  101 INYLQATIEELENDKLYDVVICLEVIEHVANIQQFILNLVQHIKPNGIAIISTMNRTKKAYLFGIIVAEYILGWVPKNTHDYSKFVKPSEIYEILTDTNIEIKELKGLVFNLAKNEWKLSNDIDVNY 227          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BARHE (3-demethylubiquinone-9 3-methyltransferase OS=Bartonella henselae GN=ubiG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.879e-23
Identity = 52/127 (40.94%), Postives = 78/127 (61.42%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 403
            E L  E  +FD ++  EV+EHVAD   F ++ + +   +G   IST+NR+ +A+  AII AE+IL WLPKGTH +  FL P EL  +L + ++ V +  G  YNPL   W+ S D++VN++    K+
Sbjct:  121 EALATEGEQFDIILNMEVVEHVADVNLFIEATAKMLKPQGLMFISTLNRTWKAWGLAIIGAEYILRWLPKGTHNYKKFLKPRELKNLLLQNALTVVDEIGVTYNPLNDSWNRSKDMNVNYLLLAKKS 247          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RICCK (3-demethylubiquinone-9 3-methyltransferase OS=Rickettsia canadensis (strain McKiel) GN=ubiG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.910e-23
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 2
Query:    2 INIIPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 406
            IN +  T + ++  + +D VI  EVIEHV +  +F  +L       G  +ISTINR  +AY   II AE+IL W+PK TH +S FL P E+  +L    I++KE+ G +Y+     W LSD+I VN+  +  +N+
Sbjct:  101 INYLQSTIEELKSNKLYDVVICLEVIEHVENVQQFILNLVQHIKPNGIAIISTINRMKKAYILGIIVAEYILGWVPKNTHNYSKFLKPSEIYEMLTDTGIEIKELKGLIYDMAKNEWKLSDNIEVNYFMYLERNT 235          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_RHIE62.204e-2340.483-demethylubiquinone-9 3-methyltransferase OS=Rhiz... [more]
UBIG_BRUSU2.204e-2339.683-demethylubiquinone-9 3-methyltransferase OS=Bruc... [more]
UBIG_BRUSI2.204e-2339.683-demethylubiquinone-9 3-methyltransferase OS=Bruc... [more]
UBIG_BRUO22.204e-2339.683-demethylubiquinone-9 3-methyltransferase OS=Bruc... [more]
UBIG_BRUC22.204e-2339.683-demethylubiquinone-9 3-methyltransferase OS=Bruc... [more]
UBIG_BRUA22.204e-2339.683-demethylubiquinone-9 3-methyltransferase OS=Bruc... [more]
UBIG_BRUA12.204e-2339.683-demethylubiquinone-9 3-methyltransferase OS=Bruc... [more]
UBIG_RICPR2.879e-2342.523-demethylubiquinone-9 3-methyltransferase OS=Rick... [more]
UBIG_BARHE2.879e-2340.943-demethylubiquinone-9 3-methyltransferase OS=Bart... [more]
UBIG_RICCK4.910e-2339.263-demethylubiquinone-9 3-methyltransferase OS=Rick... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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