FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BARBK (3-demethylubiquinone-9 3-methyltransferase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=ubiG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.910e-23
Identity = 49/121 (40.50%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            EKL ++  KFD ++  E++EHVAD   F  + + +   +G   I+T+NR+ +++  AI+ AE+IL WLPKGTH +  FL P+EL  +L   S+ V +  G  YNPL   W+ S D+ VN++
Sbjct:  121 EKLADKGEKFDIILNMEIVEHVADVDLFISATAKMLKPQGLMFIATLNRTWKSWGLAIVGAEYILRWLPKGTHDYKKFLKPQELKKLLLTNSLKVIDELGITYNPLNDSWNRSKDMDVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PELUB (3-demethylubiquinone-9 3-methyltransferase OS=Pelagibacter ubique GN=ubiG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.413e-23
Identity = 47/126 (37.30%), Postives = 81/126 (64.29%), Query Frame = 2
Query:   26 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 403
            +++++++KFD ++  E++EHV D   F K  S L    G   I+T+N+++++Y  AI+ AE+IL WLP GTH W  F+ P EL+ I ++ ++ +K++ G  +N L   W +++D SVN+I    KN
Sbjct:  115 EMLKDKKKFDVILNMEIVEHVNDIDFFIKESSKLLKKNGIMFIATLNKTLKSYVFAIVGAEYILKWLPIGTHDWEKFVKPSELIDISKKNNLSLKKLDGMNFNILDNSWKVTNDTSVNYITKFIKN 240          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BART1 (3-demethylubiquinone-9 3-methyltransferase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=ubiG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.376e-23
Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 403
            E L  E  KFD ++  EV+EHVAD   F  + + +   +G   ++T+NR+ +A+  AII AE+IL WLPKGTH +  FL P EL   L + ++ V +  G  YNPL   W+ S D+ VN++    ++
Sbjct:  121 EALANEGEKFDIILNMEVVEHVADVNLFINATAKMLKPQGLMFVATLNRTWKAWGFAIIGAEYILRWLPKGTHDYKKFLKPRELKNFLSKNALTVIDEIGITYNPLNDSWNRSKDMDVNYLLLAKRS 247          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHILW (3-demethylubiquinone-9 3-methyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ubiG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.094e-22
Identity = 49/128 (38.28%), Postives = 80/128 (62.50%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 406
            E+L +    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AAE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN++    +++
Sbjct:  121 EELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNYMLLAKRSA 248          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_METSB (3-demethylubiquinone-9 3-methyltransferase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=ubiG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.094e-22
Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L  E   FDAV+A EV+EHV D A F +   AL    G    +T+NR+++++A AI+ AE++L W P+GTH W  F++P EL   +  A +   +  G V++PL G W L+ D  +N++   +K
Sbjct:  129 EALSGEAATFDAVLAMEVLEHVLDVAGFVRCCGALVRPGGLMFAATLNRTLKSFAFAIVGAEYVLGWAPRGTHDWRRFISPRELARAMAAADLSAFDETGVVFDPLQGGWRLAHDTDINYMMAASK 254          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHILO (3-demethylubiquinone-9 3-methyltransferase OS=Rhizobium loti GN=ubiG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.429e-22
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 406
            E L +    FD ++  EV+EHVAD   F      +    G   ++TINR+++A   AII AE++L WLP+GTHQ+   + PEEL   L  AS+ + +  G  YNPL  RW+ S D+ VN++    K S
Sbjct:  121 EDLADAGETFDVILNMEVVEHVADIDLFVAKCGQMVRPGGIMFVATINRTLKALGLAIIGAEYVLRWLPRGTHQFGKLVRPEELEKALGGASLTIIDRTGVTYNPLADRWARSKDMDVNYMVLAEKGS 248          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHIEC (3-demethylubiquinone-9 3-methyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ubiG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.429e-22
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AAE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W LS D+ VN++
Sbjct:  121 EELAEAGETFDIVLNMEVVEHVADVELFMTTCAKMVRPGGLIFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEKPLAASGLEITDRTGVFFNPLSNQWKLSRDMDVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ALHEH (3-demethylubiquinone-9 3-methyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=ubiG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.429e-22
Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 2
Query:   38 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            ++ +FDAV   E++EHV DPA    + + L    G  + ST+NR+ ++Y  AI+ AE++L  LPKGTH W  F+ P EL    + A + ++ M G  YNPL  R+ L+DD SVN++A
Sbjct:  120 DEPRFDAVTCLEMLEHVPDPASAVHACARLVKPGGHVIFSTLNRNPKSYLFAILGAEYLLQLLPKGTHDWQQFIRPSELDRWAREADLVLRSMKGLTYNPLNQRYKLTDDTSVNYLA 236          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHISN (3-demethylubiquinone-9 3-methyltransferase OS=Rhizobium sp. (strain NGR234) GN=ubiG PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.437e-22
Identity = 50/121 (41.32%), Postives = 75/121 (61.98%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AAE++L WLP+GTHQ+   + PEEL   L+ + + V +  G  +NPL  +W+LS D+ VN++
Sbjct:  121 EALAEAGESFDIVLNMEVVEHVADVDFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAAENVLRWLPRGTHQYEKLVRPEELEKPLEASGMQVTDRTGVFFNPLANQWNLSKDMDVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: COQ3_DICDI (Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial OS=Dictyostelium discoideum GN=coq3 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.437e-22
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 2
Query:   32 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            +E  ++FDAV + EVIEHV +P +F   LS +    G+  ISTIN++  +Y +AI+ AE+I   +P GTH W  F+ P++L       +  + ++ G VYNPLT  W  ++D++VN++    K
Sbjct:  198 IENDQQFDAVCSLEVIEHVDNPKQFIDYLSKIVKPGGSIFISTINKTFLSYISAILGAEYIFRMVPVGTHHWDQFIKPKDLESYFDSNNCQITDLKGLVYNPLTCEWDFTNDLNVNYLLHAIK 320          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_BARBK4.910e-2340.503-demethylubiquinone-9 3-methyltransferase OS=Bart... [more]
UBIG_PELUB6.413e-2337.303-demethylubiquinone-9 3-methyltransferase OS=Pela... [more]
UBIG_BART18.376e-2339.373-demethylubiquinone-9 3-methyltransferase OS=Bart... [more]
UBIG_RHILW1.094e-2238.283-demethylubiquinone-9 3-methyltransferase OS=Rhiz... [more]
UBIG_METSB1.094e-2238.893-demethylubiquinone-9 3-methyltransferase OS=Meth... [more]
UBIG_RHILO1.429e-2239.843-demethylubiquinone-9 3-methyltransferase OS=Rhiz... [more]
UBIG_RHIEC1.429e-2241.323-demethylubiquinone-9 3-methyltransferase OS=Rhiz... [more]
UBIG_ALHEH1.429e-2241.883-demethylubiquinone-9 3-methyltransferase OS=Alka... [more]
UBIG_RHISN2.437e-2241.323-demethylubiquinone-9 3-methyltransferase OS=Rhiz... [more]
COQ3_DICDI2.437e-2238.21Hexaprenyldihydroxybenzoate methyltransferase, mit... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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