FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHIME (3-demethylubiquinone-9 3-methyltransferase OS=Rhizobium meliloti GN=ubiG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.183e-22
Identity = 48/121 (39.67%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AAE++L WLP+GTHQ+   + P+EL   L+ + +++ +  G  +NPL  +W+LS D+ VN++
Sbjct:  121 EALAEAGESFDVVLNMEVVEHVADVEFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAAENVLRWLPRGTHQYDKLVRPDELERPLEASGMEIADRTGVFFNPLANQWNLSRDMDVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ACTP7 (3-demethylubiquinone-9 3-methyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ubiG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.183e-22
Identity = 49/114 (42.98%), Postives = 74/114 (64.91%), Query Frame = 2
Query:   47 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            KFD +   E++EHV DP    +S  AL   +G    STINR+++AY   II AE++L  LPKGTH++  F+ P EL+     A++  +EM G+ +NPLT ++ L++D+S N+IA
Sbjct:  118 KFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTLKAYMLVIIGAEYVLKMLPKGTHEFEKFIKPAELLNWCDMANLRCQEMKGYHFNPLTEKFWLNNDVSCNYIA 231          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ACIBY (3-demethylubiquinone-9 3-methyltransferase OS=Acinetobacter baumannii (strain AYE) GN=ubiG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.183e-22
Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   11 IPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            IP  E   E+  ++D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LPKGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K
Sbjct:  105 IPVEELAQEQAGQYDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLPKGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTVK 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ACIB5 (3-demethylubiquinone-9 3-methyltransferase OS=Acinetobacter baumannii (strain AB0057) GN=ubiG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.183e-22
Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   11 IPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            IP  E   E+  ++D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LPKGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K
Sbjct:  105 IPVEELAQEQAGQYDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLPKGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTVK 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ACIB3 (3-demethylubiquinone-9 3-methyltransferase OS=Acinetobacter baumannii (strain AB307-0294) GN=ubiG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.183e-22
Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   11 IPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            IP  E   E+  ++D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LPKGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K
Sbjct:  105 IPVEELAQEQAGQYDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLPKGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTVK 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHIL3 (3-demethylubiquinone-9 3-methyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ubiG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.157e-22
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AAE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN++
Sbjct:  121 EGLAEAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFAAENILRWLPRGTHQYEKLVRPEELEEPLVASGLEITDRTGVSFNPLSNQWNLSKDMDVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ACIBS (3-demethylubiquinone-9 3-methyltransferase OS=Acinetobacter baumannii (strain SDF) GN=ubiG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.157e-22
Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   11 IPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            IP  E   E+  ++D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LPKGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K
Sbjct:  105 IPVEELAQEQAGQYDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLPKGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTIK 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ACIBC (3-demethylubiquinone-9 3-methyltransferase OS=Acinetobacter baumannii (strain ACICU) GN=ubiG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.157e-22
Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   11 IPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            IP  E   E+  ++D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LPKGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K
Sbjct:  105 IPVEELAQEQAGQYDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLPKGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTIK 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_SINMW (3-demethylubiquinone-9 3-methyltransferase OS=Sinorhizobium medicae (strain WSM419) GN=ubiG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.429e-22
Identity = 48/121 (39.67%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AAE++L WLP+GTHQ+   + PEE+   L  + +++ +  G  +NPL+ +W+LS D+ VN++
Sbjct:  121 EALAEAGESFDVVLNMEVVEHVADVDFFMTTCAHMVRPGGMMFVATINRTLKAAALAIFAAENVLRWLPRGTHQYEKLVRPEEIENPLVASGLEIADRTGVFFNPLSNQWNLSKDMDVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEU5 (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=ubiG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.429e-22
Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 406
            E   +FD V   E++EHV DPA   ++ + L    G    STINR+ +AYA AII AE++L  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + LS D+ VN++    K S
Sbjct:  109 EAPEQFDVVTCLEMLEHVPDPASVIRACATLVKPGGQVFFSTINRNPKAYAFAIIGAEYVLQLLPRGTHDFKKFIRPSELGAWSRDAGLAVKDIIGLTYNPLTKHYKLSADVDVNYMVQTVKES 232          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_RHIME3.183e-2239.673-demethylubiquinone-9 3-methyltransferase OS=Rhiz... [more]
UBIG_ACTP73.183e-2242.983-demethylubiquinone-9 3-methyltransferase OS=Acti... [more]
UBIG_ACIBY3.183e-2239.233-demethylubiquinone-9 3-methyltransferase OS=Acin... [more]
UBIG_ACIB53.183e-2239.233-demethylubiquinone-9 3-methyltransferase OS=Acin... [more]
UBIG_ACIB33.183e-2239.233-demethylubiquinone-9 3-methyltransferase OS=Acin... [more]
UBIG_RHIL34.157e-2241.323-demethylubiquinone-9 3-methyltransferase OS=Rhiz... [more]
UBIG_ACIBS4.157e-2239.233-demethylubiquinone-9 3-methyltransferase OS=Acin... [more]
UBIG_ACIBC4.157e-2239.233-demethylubiquinone-9 3-methyltransferase OS=Acin... [more]
UBIG_SINMW5.429e-2239.673-demethylubiquinone-9 3-methyltransferase OS=Sino... [more]
UBIG_PSEU55.429e-2241.943-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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