FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_HAHCH (3-demethylubiquinone-9 3-methyltransferase OS=Hahella chejuensis (strain KCTC 2396) GN=ubiG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.429e-22
Identity = 50/127 (39.37%), Postives = 73/127 (57.48%), Query Frame = 2
Query:   23 EKLVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+L E E   FD V   E++EHV DPA    + + +         STINR+ +++  AI+ AE++L  LP+GTH+W  F+ P EL   L+ A +D+ EM G  YNPL   + L DD+ VN++    K
Sbjct:  107 EELAEAEAESFDVVTCMEMLEHVPDPASVIAACARVAKPGADLFFSTINRNPKSFLFAIVGAEYVLKMLPRGTHEWKKFIKPSELAAWLRSADLDLCEMRGMTYNPLLKEYKLGDDVDVNYLMHAVK 233          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_AGRRK (3-demethylubiquinone-9 3-methyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ubiG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.429e-22
Identity = 50/121 (41.32%), Postives = 74/121 (61.16%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AAE++L WLP+GTHQ+   + PEE+   L    +D+    G  Y+PL  RW+LS D+ VN++
Sbjct:  121 EQLAEAGETFDIVLNMEVVEHVADVEFFLTTCAKMVRPGGLMYVATINRTMKAAALAIFAAENVLRWLPRGTHQYEKLVRPEEIEKPLAADGLDIIARTGVFYSPLQDRWNLSKDMDVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RALSO (3-demethylubiquinone-9 3-methyltransferase OS=Ralstonia solanacearum GN=ubiG PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 7.090e-22
Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 2
Query:   38 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E   FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP+GTH ++ F+ P EL    + A ++  ++ G  YNPLTGR++L+ D SVN++
Sbjct:  114 EPGSFDVVTCMEMLEHVPDPASVVRACATLVKPGGHVFFSTIHRNAKAYLLAVIGAEYVLNMLPRGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPLTGRYALTHDTSVNYL 229          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PASMU (3-demethylubiquinone-9 3-methyltransferase OS=Pasteurella multocida GN=ubiG PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.260e-22
Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 2
Query:   38 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            E  KFD +   E++EHV DP+        L    G    STINR+++A+A  II AE++L  LPKGTH +  F+ P EL+     A +   +M G+ YNPLTG++ L+ D+S N++A
Sbjct:  120 EDEKFDVITCMEMLEHVPDPSSIIACCKQLLKPNGVIFFSTINRTLKAWALVIIGAEYVLKMLPKGTHDYDKFIKPAELLHWCDEAQLTCLDMVGYHYNPLTGKFWLNKDVSANYMA 236          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ACTP2 (3-demethylubiquinone-9 3-methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ubiG PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.260e-22
Identity = 48/114 (42.11%), Postives = 73/114 (64.04%), Query Frame = 2
Query:   47 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            KFD +   E++EHV DP    +S  AL   +G    STINR+++AY   II AE++L  LPKGTH++  F+ P EL+     A +  +EM G+ +NP+T ++ L++D+S N+IA
Sbjct:  118 KFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTLKAYMLVIIGAEYVLKMLPKGTHEFEKFIKPAELLNWCDMADLRCQEMKGYHFNPVTEKFWLNNDVSCNYIA 231          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_METCA (3-demethylubiquinone-9 3-methyltransferase OS=Methylococcus capsulatus GN=ubiG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.209e-21
Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = 2
Query:   23 EKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            E L + Q  +FD V   E++EHV DPA    + + L    G    ST+NRS++AY  AI+ AE++L  +P+GTH ++SF+ P EL    +   +D+  M G  YNP+TG++ L+ DI VN++A
Sbjct:  106 EALADSQPGEFDVVTCMEMLEHVPDPASVVAACTRLAKPGGTVFFSTLNRSLKAYLLAIVGAEYLLRMIPRGTHDFASFIRPSELSRWARDGGLDLAGMEGIGYNPITGQFHLTSDIGVNYLA 228          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEAE (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas aeruginosa GN=ubiG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 2
Query:   23 EKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E++ EE   +FD V   E++EHV DPA   ++   L    G   +STINR+ +AY  A+I AE+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L++D+ VN++
Sbjct:  104 EQMAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLFAVIGAEYILQLLPRGTHDFRKFIRPSELGAWSREAGLEVKDIIGLTYNPLTKHYKLANDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEAB (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ubiG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 2
Query:   23 EKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E++ EE   +FD V   E++EHV DPA   ++   L    G   +STINR+ +AY  A+I AE+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L++D+ VN++
Sbjct:  104 EQMAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLFAVIGAEYILQLLPRGTHDFRKFIRPSELGAWSREAGLEVKDIIGLTYNPLTKHYKLANDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEA8 (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=ubiG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 2
Query:   23 EKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E++ EE   +FD V   E++EHV DPA   ++   L    G   +STINR+ +AY  A+I AE+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L++D+ VN++
Sbjct:  104 EQMAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLFAVIGAEYILQLLPRGTHDFRKFIRPSELGAWSREAGLEVKDIIGLTYNPLTKHYKLANDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_MARAV (3-demethylubiquinone-9 3-methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 44/117 (37.61%), Postives = 75/117 (64.10%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E   ++D V   E++EHV DPA   ++ +++    G   +STINR+ +++  AI+ AE++L+ LPKGTH+W  F+ P E+   L+ A ++V+E+ G  YNP+T  + L  D+ VN++
Sbjct:  113 EHAGQYDVVTCLEMLEHVPDPASVIRACASMLKPGGHMFVSTINRNPKSFLFAIVGAEYVLNLLPKGTHEWKKFIRPSEMSDHLRHAGLEVRELTGMTYNPITKVYKLGRDVDVNYL 229          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_HAHCH5.429e-2239.373-demethylubiquinone-9 3-methyltransferase OS=Hahe... [more]
UBIG_AGRRK5.429e-2241.323-demethylubiquinone-9 3-methyltransferase OS=Agro... [more]
UBIG_RALSO7.090e-2240.523-demethylubiquinone-9 3-methyltransferase OS=Rals... [more]
UBIG_PASMU9.260e-2241.033-demethylubiquinone-9 3-methyltransferase OS=Past... [more]
UBIG_ACTP29.260e-2242.113-demethylubiquinone-9 3-methyltransferase OS=Acti... [more]
UBIG_METCA1.209e-2140.653-demethylubiquinone-9 3-methyltransferase OS=Meth... [more]
UBIG_PSEAE1.580e-2140.983-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_PSEAB1.580e-2140.983-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_PSEA81.580e-2140.983-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_MARAV1.580e-2137.613-demethylubiquinone-9 3-methyltransferase OS=Mari... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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