FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: COQ3_HUMAN (Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial OS=Homo sapiens GN=COQ3 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 51/128 (39.84%), Postives = 79/128 (61.72%), Query Frame = 2
Query:   23 EKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 403
            E++VEE  + FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+ +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N+ A   K+
Sbjct:  206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIVFSEQIAGIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLNYAAHAVKS 333          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: COQ3_BOVIN (Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial OS=Bos taurus GN=COQ3 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 50/129 (38.76%), Postives = 81/129 (62.79%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 406
            E++V++    FDAV+ASEV+EHV D   F +    +   +G+  I+TIN++  +YA  I+ +E I   +PKGTH W  F++PE+L  IL+   + V+ + G +YNP +G W  S++ S+N+ A   K+S
Sbjct:  207 EEIVKDTVETFDAVVASEVVEHVIDLETFIQCCFQVLKPDGSLFITTINKTQLSYALGIVFSEQIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLNYAAHALKSS 335          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ACIAC (3-demethylubiquinone-9 3-methyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ubiG PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.063e-21
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L EE    FD V   E++EHV DPA   ++ + L    G    STINR+ +A+  AI+ AE++L  LP+GTH+++  + P EL    + A +DV +  G  YNPLT R++LS D SVN++
Sbjct:  109 EALAEESPASFDTVTCMEMLEHVPDPASVVQACARLVKPGGWVFFSTINRNAKAFLLAIVGAEYVLGMLPRGTHEYAKLIKPSELATACRSARLDVLQTRGMEYNPLTRRYALSGDTSVNYL 230          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RALEJ (3-demethylubiquinone-9 3-methyltransferase OS=Ralstonia eutropha (strain JMP134) GN=ubiG PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.694e-21
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 2
Query:   38 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E    D V   E++EHV DP    ++ + L    G   +STINR+++AY  A++ AE+IL  LP+GTH +  F+TP E+    + A +D+ EM G  YNPL+  +SLS D  VN++
Sbjct:  126 EPGSVDVVTCMEMLEHVPDPESIVQACATLVRPGGHVFVSTINRNLKAYLMAVVGAEYILQMLPRGTHDYEKFITPSEMARFARNAGLDLVEMRGMTYNPLSQIYSLSRDTDVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEA7 (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=ubiG PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.694e-21
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 2
Query:   23 EKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E++ EE   +FD V   E++EHV DPA   ++   L    G   +STINR+ +AY  A+I AE+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L++D+ VN++
Sbjct:  104 EQMAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLFAVIGAEYILQLLPRGTHDFRKFIRPSELGAWSRDAGLEVKDIIGLTYNPLTKHYKLANDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEE4 (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas entomophila (strain L48) GN=ubiG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.519e-21
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + LS+D+ VN++
Sbjct:  104 EALAEEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIIGAEYILKMLPRGTHDFKKFIRPSELGAWSRVAGLEVKDIIGLTYNPLTKHYKLSNDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_ACIAD (3-demethylubiquinone-9 3-methyltransferase OS=Acinetobacter sp. (strain ADP1) GN=ubiG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.519e-21
Identity = 50/130 (38.46%), Postives = 75/130 (57.69%), Query Frame = 2
Query:   11 IPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            IP  E   E+  ++D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LPKGTH +  F+ P E+   ++ A + +K+M G  YNPLT  + L+ ++ VN++    K
Sbjct:  105 IPVEELAQEQAGQYDIVTCMEMMEHVPDPASIIKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLPKGTHDYHKFIRPSEMAHDIREAGLKLKDMTGLHYNPLTKHYWLAPNVDVNYMVHTLK 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOFD (3-demethylubiquinone-9 3-methyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=ubiG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.596e-21
Identity = 47/124 (37.90%), Postives = 76/124 (61.29%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 406
            ++   FD V   E++EHV DPA   ++ + L    G    ST+NRS +++  AI+ AE++L+ LP+GTH+++  + P EL    +   +D++   G  YNPLT R+ +SDD SVN++ F T+ S
Sbjct:  125 QQPGSFDVVTCMEMLEHVPDPASVVRACATLVKPGGWVFFSTLNRSPKSFVLAIVGAEYVLNLLPRGTHEYAKMIRPSELASYCRSVELDLRHTRGMQYNPLTRRYWMSDDTSVNYL-FATQKS 247          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_CHRVO (3-demethylubiquinone-9 3-methyltransferase OS=Chromobacterium violaceum GN=ubiG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.596e-21
Identity = 45/112 (40.18%), Postives = 74/112 (66.07%), Query Frame = 2
Query:   50 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            FDAV   E++EHV DP    ++ S L    G    ST+NR+ +AY  A++ AE++L+ LP+GTH+++ FL P EL  + + A + ++ ++G  YNP+T  +SL+DD +VN++
Sbjct:  114 FDAVTCMEMLEHVPDPESVVRACSTLVKPGGWVFFSTLNRNAKAYLLAVVGAEYVLNMLPRGTHEYARFLKPSELGRMARHAGLGLQTLSGMGYNPVTRIYSLNDDTAVNYL 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEPW (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas putida (strain W619) GN=ubiG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.002e-21
Identity = 50/122 (40.98%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L EE   +FD +   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + LS D+ VN++
Sbjct:  104 EALAEEMPEQFDVITCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIIGAEYILKMLPRGTHDFKKFIRPSELGAWSRVAGLEVKDIIGLTYNPLTKHYKLSSDVDVNYM 225          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
COQ3_HUMAN1.580e-2139.84Hexaprenyldihydroxybenzoate methyltransferase, mit... [more]
COQ3_BOVIN1.580e-2138.76Hexaprenyldihydroxybenzoate methyltransferase, mit... [more]
UBIG_ACIAC2.063e-2141.803-demethylubiquinone-9 3-methyltransferase OS=Acid... [more]
UBIG_RALEJ2.694e-2140.523-demethylubiquinone-9 3-methyltransferase OS=Rals... [more]
UBIG_PSEA72.694e-2140.983-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_PSEE43.519e-2141.803-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_ACIAD3.519e-2138.463-demethylubiquinone-9 3-methyltransferase OS=Acin... [more]
UBIG_RHOFD4.596e-2137.903-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]
UBIG_CHRVO4.596e-2140.183-demethylubiquinone-9 3-methyltransferase OS=Chro... [more]
UBIG_PSEPW6.002e-2140.983-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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