FC873287

Overview
NameFC873287
Unique NameFC873287
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10142 contig Ccv1_Contig10142:1..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19
Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 3
Query:    3 KSVKLVLVAIILDCLHYLALSDYQGDALFALRTSLRVPNNQLRDWNQ-NQVNPCTWSNVICDN-SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425
            K +   L  ++   L  ++  + +G AL A++ S     N L DW+  +  + C+W  V CDN S NV S+ LS++N  G +S  +G L  L ++ L+GN + G+IP+E+GN  SL  +D   N L G IP S+  LK+L+FL
Sbjct:    8 KGLFFCLGMVVFMLLGSVSPMNNEGKALMAIKASFSNVANMLLDWDDVHNHDFCSWRGVFCDNVSLNVVSLNLSNLNLGGEISSALGDLMNLQSIDLQGNKLGGQIPDEIGNCVSLAYVDFSTNLLFGDIPFSISKLKQLEFL 150          

HSP 2 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 3
Query:  198 VASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKL 416
            +A + LS    +G + P +G L     L L GN +TG+IP ELGN+S L+ L L +N LVGKIPP LG L++L
Sbjct:  290 LAVLDLSDNELTGPIPPILGNLSFTGKLYLHGNKLTGQIPPELGNMSRLSYLQLNDNELVGKIPPELGKLEQL 362          
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 53/146 (36.30%), Postives = 74/146 (50.68%), Query Frame = 3
Query:   15 LVLVAIILDCL----HYLALSDYQGDALFALRTSL---RVPNNQLRDW--NQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425
            L  + ++  CL    H +++S    D L  L       RVP      W  N ++  PC W  + CD+S NVAS+  +    SG L P IG L++L  L L  N  +G IP  LGN + L +LDL  N    KIP +L +LK+L+ L
Sbjct:    7 LFKILLLFFCLFLSTHIISVSCLNSDGLTLLSLLKHLDRVPPQVTSTWKINASEATPCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRLEVL 152          

HSP 2 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  186 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425
            N +++ ++ + S N SGT+   +G+L+ L+ L L  N ++G IP ELGN SSL  L L +N+LVG IP +LG L+KL+ L
Sbjct:  289 NCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESL 368          
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.257e-17
Identity = 47/118 (39.83%), Postives = 64/118 (54.24%), Query Frame = 3
Query:   75 GDALFAL-RTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425
            G AL +L R    +P++  + WN +   PC+W  V CD    V ++ LSS   SG   P I  L+ L  + L GNG  G IP +LGN S L  +DL +N   G IP +LG L+ L+ L
Sbjct:   28 GAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVECDRRQFVDTLNLSSYGISGEFGPEISHLKHLKKVVLSGNGFFGSIPSQLGNCSLLEHIDLSSNSFTGNIPDTLGALQNLRNL 145          
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.269e-15
Identity = 46/111 (41.44%), Postives = 61/111 (54.95%), Query Frame = 3
Query:  108 RVPNNQLRDWNQN--QVNPCT--WSNVICDNSNNVA-SVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425
            +VP      W +N  +  PC   W  VICD S NV  ++ LS+   SG L   IG L++L TL L  N  +G +P  LGN +SL  LDL NN   G++P   G+L+ L FL
Sbjct:   43 KVPLEVASTWKENTSETTPCNNNWFGVICDLSGNVVETLNLSASGLSGQLGSEIGELKSLVTLDLSLNSFSGLLPSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLTFL 153          

HSP 2 Score: 22.7126 bits (47), Expect = 1.269e-15
Identity = 14/52 (26.92%), Postives = 18/52 (34.62%), Query Frame = 1
Query:  538 LSQNNFSGTIPXXXXXXXXXXXXXXXXXXXXGQIPVHLFQIPKYN--FTGNN 687
            +S NN SGTIP                    G +P  L+ +      F  NN
Sbjct:  179 MSYNNLSGTIPELLGNCSKLEYLALNNNKLNGSLPASLYLLENLGELFVSNN 230          

HSP 3 Score: 74.7146 bits (182), Expect = 6.015e-13
Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = 3
Query:  186 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425
            N +++ S+ +   N +GT+   +G+LR +S + L  N ++G IP+ELGN SSL +L L +N+L G+IPP+L  LKKLQ L
Sbjct:  266 NCSSLHSLVMVKCNLTGTIPSSMGMLRKVSVIDLSDNRLSGNIPQELGNCSSLETLKLNDNQLQGEIPPALSKLKKLQSL 345          
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15
Identity = 46/120 (38.33%), Postives = 65/120 (54.17%), Query Frame = 3
Query:   81 ALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVIC-----DNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425
            AL  +   L+ P N L+DW +       W+ VIC     D   +V  + L +MN +G L+P +G+L  L+ L    N +TG+IP ELGNL+ L  L L  N+L G +P  LG+L  L  L
Sbjct:   35 ALQYVHRKLKDPLNHLQDWKKTDPCASNWTGVICIPDPSDGFLHVKELRLLNMNLTGQLAPELGLLSNLTILNFMWNDLTGQIPPELGNLTHLIFLLLSGNQLTGSLPQELGSLSNLLIL 154          
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15
Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 3
Query:   81 ALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSN------NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKL 416
            AL  ++ SL  P ++LR+W         W+ V+C NS       +V+ + L SMN SG LSP +G L  L+ L+   N ITG IP+E+GN+ SL  L L  N L G +P  LG L  L
Sbjct:   40 ALRVIKESLNDPVHRLRNWKHGDPCNSNWTGVVCFNSTLDDGYLHVSELQLFSMNLSGNLSPELGRLSRLTILSFMWNKITGSIPKEIGNIKSLELLLLNGNLLNGNLPEELGFLPNL 157          
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 46/108 (42.59%), Postives = 58/108 (53.70%), Query Frame = 3
Query:  120 NQLRDWNQNQVNPCTWSNVICD--------NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQ 419
            N+L +WN     PC W  V C         NS  V S+ LSSMN SG +SP IG L  L  L L  N +TG+IP E+GN S L  + L NN+  G IP  +  L +L+
Sbjct:   53 NRLHNWNGIDETPCNWIGVNCSSQGSSSSSNSLVVTSLDLSSMNLSGIVSPSIGGLVNLVYLNLAYNALTGDIPREIGNCSKLEVMFLNNNQFGGSIPVEINKLSQLR 160          
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 3
Query:  126 LRDWNQNQVNPCTWSNVICDNS-NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425
            + +WN    +PC W+ + C  S ++V  + +S+ +  G L+P +G +  L  L L GN + G IP+E+GNL +L  LDL NN L+G IP  +G+L  +  +
Sbjct:   46 MSNWNDPNSDPCDWTGIYCSPSKDHVIKINISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNLKILDLGNNHLMGPIPAEIGSLSGIMII 146          
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = 3
Query:  117 NNQLRDWNQNQVNPCTWSNVICDNS--------------------------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 425
            ++ LR WN + +N C+W+ V CDN+                          +N+  + LSS N  G +   +  L +L +L L  N +TGEIP +LG+L ++ SL + +N LVG IP +LGNL  LQ L
Sbjct:   44 DDPLRQWNSDNINYCSWTGVTCDNTGLFRVIALNLTGLGLTGSISPWFGRFDNLIHLDLSSNNLVGPIPTALSNLTSLESLFLFSNQLTGEIPSQLGSLVNIRSLRIGDNELVGDIPETLGNLVNLQML 172          
BLAST of FC873287 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 52/150 (34.67%), Postives = 76/150 (50.67%), Query Frame = 3
Query:    6 SVKLVLVAIILDCLHYLALSDY------QGDALFALRTSLRVPNNQLRDWN-----QNQVNPCTWSNVICDN-SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQ 419
            S  LVL  ++L  L + A +        Q  +L +L+TSL  P +  +DW      QN    C+WS V+CDN +  V S+ LS  N SG +  +I  L +L  L L GN + G  P  + +L+ LT+LD+  N      PP +  LK L+
Sbjct:    7 SPSLVLHPLLLLLLPFFAFNSLALKFSPQLLSLLSLKTSLSGPPSAFQDWKVPVNGQNDAVWCSWSGVVCDNVTAQVISLDLSHRNLSGRIPIQIRYLSSLLYLNLSGNSLEGSFPTSIFDLTKLTTLDISRNSFDSSFPPGISKLKFLK 156          
The following BLAST results are available for this feature:
BLAST of FC873287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ERL2_ARATH5.617e-1937.06LRR receptor-like serine/threonine-protein kinase ... [more]
PEPR1_ARATH8.110e-1836.30Leucine-rich repeat receptor-like protein kinase P... [more]
RPK1_IPONI5.257e-1739.83Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
PEPR2_ARATH1.269e-1541.44Leucine-rich repeat receptor-like protein kinase P... [more]
Y5374_ARATH1.295e-1538.33Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH1.295e-1540.68Probable LRR receptor-like serine/threonine-protei... [more]
Y2317_ARATH4.920e-1542.59Probable leucine-rich repeat receptor-like protein... [more]
Y1634_ARATH6.426e-1536.63Probable LRR receptor-like serine/threonine-protei... [more]
GSO1_ARATH1.096e-1434.88LRR receptor-like serine/threonine-protein kinase ... [more]
Y5148_ARATH1.870e-1434.67Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BC07FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873287 ID=FC873287; Name=FC873287; organism=Citrus clementina; type=EST; length=756bp
TGAAGAGCGTGAAATTGGTCCTTGTTGCTATAATATTGGATTGCTTGCAT
TATTTGGCGCTGTCTGATTATCAAGGAGATGCACTATTTGCATTGAGGAC
TTCATTGCGTGTTCCAAACAATCAGCTAAGAGATTGGAATCAGAACCAAG
TTAATCCTTGCACTTGGTCAAATGTCATTTGTGATAATAGCAACAATGTT
GCCTCTGTAACATTGTCTTCCATGAACTTTTCTGGAACCTTGTCCCCAAG
AATAGGAGTTCTGAGGACTCTTTCAACACTCACATTAAAAGGAAATGGCA
TAACTGGTGAAATACCTGAAGAGCTTGGTAATCTTTCAAGCTTGACAAGC
TTGGACTTGGAAAATAATCGCTTAGTTGGAAAAATACCACCTTCCCTTGG
CAATCTTAAAAAGCTTCAGTTCTTGTAAGTGATTCCATCAATAAAAATTT
TAGTTTTAATCTATATGGTTTTTCTTCACTTTTTTCATGATCTGGCACAA
AAAGTCTCGATTTGTTTTTGATCGTTGAACCAGGACTTTGAGTCAAAACA
ATTTTAGTGGGACCATCCCTGATTCACTCACAACTCTTTCAAGCTTGATC
AGTATTCAGCTGGATTCGAATAATCTCAGTGGTCAAATTCCAGTGCATTT
GTTCCAAATTCCAAAATACAATTTCACGGGAAACAACTTGAACTGTGGTA
AAACTCTTCCACATTCTTGTGAATCTAGTAGCAATGATTCANGGAGTTCA
AAGAAG
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