FC873302

Overview
NameFC873302
Unique NameFC873302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length770
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: PIT1_SCHPO (Sporulation protein kinase pit1 OS=Schizosaccharomyces pombe GN=pit1 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.268e-54
Identity = 110/224 (49.11%), Postives = 160/224 (71.43%), Query Frame = 2
Query:  125 ERYKLIKEVGDGTFGSVWRAISKQ-SGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLKEV-IRENDILYFVFEYMECNLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT------IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            E Y ++++VGDGTFGSV+ A +K  S EVVAIK MKKK     +   LREV SL ++S + NIV + ++ I +   L+ V E+++CNLYQL+  R+    +  +V++   Q+F+GL ++H  G+FHRD+KPEN+L+S ++      +KIADFGLAREINSRPP+TEYVSTRWYRAPE+LL+   YS  VD++A G +  E+ TL+P+FPG  + D++YK+C ++
Sbjct:   34 EVYNVVRKVGDGTFGSVYLATTKTPSKEVVAIKSMKKKLAKVSDATRLREVHSLLRLSENENIVNIFDLYIDQFRCLHIVMEFLDCNLYQLISTRKNDPLTLEQVQDIMRQIFKGLNHIHTNGFFHRDMKPENILISSNSDSSSFNVKIADFGLAREINSRPPYTEYVSTRWYRAPELLLRDSYYSFPVDIYAAGCMAFEIATLQPIFPGNDDFDQLYKMCEIL 257          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MOK_HUMAN (MAPK/MAK/MRK overlapping kinase OS=Homo sapiens GN=RAGE PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.589e-51
Identity = 94/218 (43.12%), Postives = 151/218 (69.27%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLKEVI--RENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M+ YK I ++G+GTF  V +  S + G   A K+MK+++ S E+  NLRE+++LR+++ HPNI+ L EV+  R++  L  + E M+ N+Y+L++ R    SE ++ ++ +Q+ + L ++H+ G FHRD+KPEN+L+ +D +K+ DFG  R + S+ P+TEY+STRWYRAPE LL    Y+ K+D+W+ G +  E+ +L+PLFPG +E D+I KI  VI
Sbjct:    1 MKNYKAIGKIGEGTFSEVMKMQSLRDGNYYACKQMKQRFESIEQVNNLREIQALRRLNPHPNILMLHEVVFDRKSGSLALICELMDMNIYELIRGRRYPLSEKKIMHYMYQLCKSLDHIHRNGIFHRDVKPENILIKQDVLKLGDFGSCRSVYSKQPYTEYISTRWYRAPECLLTDGFYTYKMDLWSAGCVFYEIASLQPLFPGVNELDQISKIHDVI 218          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MOK_MOUSE (MAPK/MAK/MRK overlapping kinase OS=Mus musculus GN=Rage PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.285e-50
Identity = 95/218 (43.58%), Postives = 149/218 (68.35%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLKEVI--RENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M+ YK I ++G+GTF  V +  S + G   A K+MK+ + S E+  +LRE+++LR+++ HPNI+ L EV+  R++  L  + E M+ N+Y+L++ R    SE ++  + +Q+ + L +MH+ G FHRD+KPEN+LV +D +K+ DFG  R + S+ P+TEY+STRWYRAPE LL    Y+ K+D+W+ G +  E+ +L+PLFPG +E D+I KI  VI
Sbjct:    1 MKNYKAIGKIGEGTFSEVMKMQSLRDGNYYACKQMKQHFESIEQVNSLREIQALRRLNPHPNILALHEVVFDRKSGSLALICELMDMNIYELIRGRRHPLSEKKIMLYMYQLCKSLDHMHRNGIFHRDVKPENILVKQDVLKLGDFGSCRSVYSKQPYTEYISTRWYRAPECLLTDGFYTYKMDLWSAGCVFYEIASLQPLFPGVNELDQISKIHDVI 218          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MDE3_SCHPO (Sporulation protein kinase mde3 OS=Schizosaccharomyces pombe GN=mde3 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.054e-44
Identity = 97/231 (41.99%), Postives = 150/231 (64.94%), Query Frame = 2
Query:  125 ERYKLIKEVGDGTFGSVWRAISKQSG---EVVAIKKMKK--KYYSWEECVNLREVKSLRKMS-HPNIVKLKEVIREN-DILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLV---------SKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            +RY + +++GDG+FG+V+ A  K+     E VA+KK+K   K     E + LRE  +LRK+S HP ++ L E   +    ++ V E+M+CNL+QL K R+ + F++    N   Q+  G+ ++H+ G+ HRD+KPEN+LV         S+ +IK+ DFGLAR   S  P TEYVSTRWYRAPE+LL+S  Y+  VD++A G I+ E+ +L+PLFPG +E D++ ++C ++
Sbjct:   19 DRYLVKQKLGDGSFGTVYLAQRKEKNGLYETVAVKKLKNSSKPKPKHELLKLRESLALRKISKHPCLIDLLETFMDPYRNIFLVMEFMDCNLFQLFKRRQGRLFTKETAFNILLQIISGIEHIHKHGFMHRDIKPENILVKRISPKPISSRYSIKLGDFGLARPSVSSDPLTEYVSTRWYRAPELLLRSGSYNHSVDLYAFGCIVFEIYSLKPLFPGRNETDQLNRVCEIL 249          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 1.054e-44
Identity = 94/215 (43.72%), Postives = 144/215 (66.98%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRP-PFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 754
            ME ++ ++++G+GT+G V++A ++++GE+VA+KK++    +       +RE+  L++++HPNIVKL +VI   + LY VFE++  +L + M        S A V+++ FQ+ QGLA+ H     HRDLKP+NLL++ D  IK+ADFGLAR        FT  V T WYRAPE+LL    YS+ VD+W++G I AE+IT R LFPG SE D++++I
Sbjct:    1 MENFQKVEKIGEGTYGVVYKARNRETGEIVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLNQDLKKFMDGSNISGISLALVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINSDGAIKLADFGLARAFGVPVRTFTHEVVTLWYRAPEILLGCKFYSTAVDIWSLGCIFAEMITRRALFPGDSEIDQLFRI 215          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDKA2_ORYSJ (Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica GN=CDKA-2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.004e-44
Identity = 87/219 (39.73%), Postives = 144/219 (65.75%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            ME+Y+ ++++G+GT+G V++   + + E +A+KK++ ++         +RE+  L++M H NIV+L++V+ +   +Y VFEY++ +L + M       +   V+++ +Q+ +G+AY H     HRDLKP+NLL+ + T  +K+ADFGLAR        FT  V T WYRAPE+LL +  YS+ VDMW++G I AE++  +PLFPG SE DE++KI S++
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKGKHRHTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHKEKCIYLVFEYLDLDLKKHMDSSPDFKNHRIVKSFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARHYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFSIM 219          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.165e-43
Identity = 91/221 (41.18%), Postives = 147/221 (66.52%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEA--EVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRP-PFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M++Y+ ++++G+GT+G V++A  K + E +A+KK++ ++         +RE+  L++M H NIVKL++V+     LY VFEY++ +L + M D    FS+    ++ + +Q+ +G+AY H     HRDLKP+NLL+ + T  +K+ADFGLAR        FT  V T WYRAPE+LL S+ YS+ VD+W++G I AE+I+ +PLFPG SE D+++KI  ++
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHSNIVKLQDVVHSEKRLYLVFEYLDLDLKKHM-DSTPDFSKDLHMIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSHHYSTPVDIWSVGCIFAEMISQKPLFPGDSEIDQLFKIFRIM 220          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.165e-43
Identity = 90/216 (41.67%), Postives = 141/216 (65.28%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDR-EKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLV--SKDTIKIADFGLAREINSRP-PFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 754
            ME+Y+ ++++G+GT+G V++A  + + E +A+KK++ ++         +RE+  L++M H NIV+L++V+     LY VFEY++ +L + M    E    + +++ + +Q+  G+AY H     HRDLKP+NLL+  S + +K+ADFGLAR        FT  V T WYRAPE+LL S  YS+ VD+W++G I AE+I  RPLFPG SE DE++KI
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKFMDSSPEFAKDQRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSNAVKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKI 216          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.521e-43
Identity = 87/220 (39.55%), Postives = 144/220 (65.45%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKD-REKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRP-PFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            ME+Y+ ++++G+GT+G V++A+ K + E +A+KK++ ++         +RE+  L++M+H NIV+L +V+     +Y VFEY++ +L + M    E   +   ++++ +Q+  G+AY H     HRDLKP+NLL+ + T  +K+ADFGLAR        FT  V T WYRAPE+LL +  YS+ VD+W++G I AE++  +PLFPG SE DE++KI  ++
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILHGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 220          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.987e-43
Identity = 92/220 (41.82%), Postives = 142/220 (64.55%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKD-REKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRP-PFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            ME+Y+  +++G+GT+G V+RA  K + E +A+KK++ ++         +RE+  L++M H NIV+L +VI     +Y VFEY++ +L + M    E   +   ++++ +Q+ +G+AY H     HRDLKP+NLL+ + T  +K+ADFGLAR        FT  V T WYRAPE+LL S  YS+ VDMW++G I AE++  +PLFPG SE DE++KI  V+
Sbjct:    1 MEQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLHDVIHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVL 220          
The following BLAST results are available for this feature:
BLAST of FC873302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PIT1_SCHPO3.268e-5449.11Sporulation protein kinase pit1 OS=Schizosaccharom... [more]
MOK_HUMAN2.589e-5143.12MAPK/MAK/MRK overlapping kinase OS=Homo sapiens GN... [more]
MOK_MOUSE1.285e-5043.58MAPK/MAK/MRK overlapping kinase OS=Mus musculus GN... [more]
MDE3_SCHPO1.054e-4441.99Sporulation protein kinase mde3 OS=Schizosaccharom... [more]
CDK2_XENLA1.054e-4443.72Cell division protein kinase 2 OS=Xenopus laevis G... [more]
CDKA2_ORYSJ4.004e-4439.73Cyclin-dependent kinase A-2 OS=Oryza sativa subsp.... [more]
CDKA1_ARATH1.165e-4341.18Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
CDC22_MEDSA1.165e-4341.67Cell division control protein 2 homolog 2 OS=Medic... [more]
CDC2_MAIZE1.521e-4339.55Cell division control protein 2 homolog OS=Zea may... [more]
CDKA1_ORYSJ1.987e-4341.82Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BD10FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873302 ID=FC873302; Name=FC873302; organism=Citrus clementina; type=EST; length=770bp
TTTTGTTTAAATTTAACAGTTTTTTCTAGCAATTATCTTGGTACAATAAA
TGTCGTATAACTTCAAAGGTTCTTACACTTTTCTTGAATAAAGAAAGAGC
TGTTTCTGTTCCACAAGAAAAATGGAAAGGTACAAGTTAATTAAGGAAGT
TGGTGATGGAACATTTGGGAGTGTCTGGCGAGCTATTAGTAAGCAGTCTG
GTGAAGTTGTTGCAATTAAAAAAATGAAGAAAAAATATTATTCCTGGGAG
GAGTGTGTCAATTTGAGAGAAGTTAAGTCGCTACGGAAAATGAGTCATCC
AAACATTGTGAAGCTTAAGGAAGTCATCCGGGAAAATGATATCTTGTACT
TTGTTTTTGAATACATGGAATGTAACCTTTACCAACTTATGAAAGACAGA
GAGAAGTGTTTCTCTGAAGCTGAAGTCAGAAATTGGTGTTTCCAAGTTTT
CCAAGGTCTGGCTTACATGCATCAGCGGGGATATTTTCATCGTGACCTTA
AGCCTGAGAACTTGCTTGTTTCAAAAGACACAATTAAAATTGCTGATTTT
GGTCTTGCGCGTGAAATTAATTCACGTCCACCGTTCACGGAGTATGTCTC
AACACGATGGTATCGAGCTCCTGAAGTGCTGCTCCAGTCATACCTGTATA
GCTCTAAAGTTGATATGTGGGCAATGGGTGCTATCATGGCTGAGTTGATC
ACTCTCCGCCCTCTCTTTCCGGGTACCAGCGAAGCAGATGAAATATACAA
AATATGCAGTGTAATANGCA
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