FC873302

Overview
NameFC873302
Unique NameFC873302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length770
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 81/215 (37.67%), Postives = 140/215 (65.12%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKY-YSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAE-VRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSK-DTIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 754
            M+ ++ ++++G+GT+G V++A ++++G++VA+KK++            +RE+  L+++ HPNIV+L +V+     LY VFE++  +L + M            ++++ FQ+ QG+++ H     HRDLKP+NLL+++   IK+ADFGLAR        +T  V T WYRAPE+LL S  Y++ VD+W++G I AE++T + LFPG SE D++++I
Sbjct:    1 MDMFQKVEKIGEGTYGVVYKAKNRETGQLVALKKIRLDLEMEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELPLHLIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLINELGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRI 215          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDK10_MOUSE (Cell division protein kinase 10 OS=Mus musculus GN=Cdk10 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 92/222 (41.44%), Postives = 139/222 (62.61%), Query Frame = 2
Query:  116 RKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK-KYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDI--LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSR-PPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            R ++ ++ +  +G+GT+G V+RA   Q+ E+VA+KK++  K        +LRE+  L ++ HPNIV+LKEV+  N +  ++ V  Y E +L  L+++    FSEA+V+    QV +GL Y+H+    HRDLK  NLL++ K  +K ADFGLAR       P T  V T WYRAPE+LL +   ++ +DMWA+G I+AEL+  +PL PGTSE  +I  I  ++
Sbjct:   34 RSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIMLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLL 255          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39
Identity = 85/214 (39.72%), Postives = 137/214 (64.02%), Query Frame = 2
Query:  140 IKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEA-EVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT--IKIADFGLAREINSRP-PFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            ++++G+GT+G V++A  + + E +A+KK++ ++         +RE+  L++M H NIV+L++V+  +  LY VFEY++ +L + M    +   +  +V+ + +Q+  G+AY H     HRDLKP+NLL+ + T  +K+ADFGLAR        FT  V T WYRAPE+LL S  YS+ VD+W++G I AE+   RPL PG SE DE++KI  ++
Sbjct:    4 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSDKRLYLVFEYLDLDLKKHMDSSPEFIKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMANRRPLSPGDSEIDELFKIFRIL 217          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: ERK2_DICDI (Extracellular signal-regulated kinase 2 OS=Dictyostelium discoideum GN=erkB PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 89/226 (39.38%), Postives = 142/226 (62.83%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKM-SHPNIVKLKEVIR-ENDI-LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINS-------RPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSV 763
            + +Y++++++G G +G VW+AI K++ + VA+KK+   + +  +     RE+  L+++  H NI+KL  VI+ +ND  +Y VFE+ME +L+ ++  R K   E   +   +Q+ + L YMH     HRD+KP NLL++ +  +K+ADFGLAR I S        P  TEYV+TRWYRAPE+LL S  Y+  VDMW++G I+ EL+  + +FPG S  +++  I  V
Sbjct:   11 LRKYEVLQKIGKGAYGIVWKAIDKKTKQTVALKKIFDAFQNATDAQRTFREIMFLQELHGHENIIKLLNVIKADNDRDIYLVFEHMETDLHAVI--RAKILEEIHKQYTIYQLLKALKYMHSANVLHRDIKPSNLLLNSECLVKVADFGLARSITSLESIAEANPVLTEYVATRWYRAPEILLGSTKYTKGVDMWSIGCILGELLGEKAMFPGNSTMNQLDLIIEV 234          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 87/218 (39.91%), Postives = 135/218 (61.93%), Query Frame = 2
Query:  116 RKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI--RENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTI-KIADFGLAREINSR-PPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 754
            R +E ++ +  + +GT+G V+RA  K++ E+VA+K++K +K        ++RE+ ++ K  HPNIV ++E++     D +Y V  Y+E +L  LM+  ++ F   EV+    Q+  G+ ++H     HRDLK  NLL++   I K+ DFGLARE  S    +T  V T WYRAPE+LL +  YS+  DMW++G I  EL+T +PLFPG S+ D+I KI
Sbjct:   74 RSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPLTSIREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSNLLLTHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTACDMWSVGCIFGELLTQKPLFPGKSDIDQINKI 291          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDK10_RAT (Cell division protein kinase 10 OS=Rattus norvegicus GN=Cdk10 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 92/222 (41.44%), Postives = 139/222 (62.61%), Query Frame = 2
Query:  116 RKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK-KYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDI--LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSR-PPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            R ++ ++ +  +G+GT+G V+RA   Q+ E+VA+KK++  K        +LRE+  L ++ HPNIV+LKEV+  N +  ++ V  Y E +L  L+++    FSEA+V+    QV +GL Y+H+    HRDLK  NLL++ K  +K ADFGLAR       P T  V T WYRAPE+LL +   ++ +DMWA+G I+AEL+  +PL PGTSE  +I  I  ++
Sbjct:   32 RSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCILLQVLRGLQYLHRSFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQIDLIVQLL 253          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 84/219 (38.36%), Postives = 139/219 (63.47%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK--KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            ME+Y  ++++G+GT+G V++A     GE  A+KK++  K+       V++RE+  L+++ H NIVKL +VI     L  VFE+++ +L +L+   +        +++  Q+  G+AY H+    HRDLKP+NLL++++  +KIADFGLAR        +T  V T WYRAP++L+ S  YS+ +D+W++G I AE++  RPLFPG SE D++ +I  ++
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKA-QNSDGESFALKKIRLEKEDEGIPSTVSIREISILKELRHSNIVKLYDVIHAKKRLILVFEHLDQDLKKLIDVCDGGLESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREGELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSETDQLMRIFKIL 218          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39
Identity = 88/218 (40.37%), Postives = 141/218 (64.68%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN---LREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKD--REKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRPP-FTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 754
            M+ Y  I+++G+GT+G V++   K +G+VVA+KK++ +  + EE V    +RE+  L+++ HPNIV L +V+ ++  LY +FE++  +L + +      +      V+++ +Q+ QG+ + H R   HRDLKP+NLL+ +K  IK+ADFGLAR        +T  V T WYRA EVLL S  YS+ VD+W++G I AE+ T +PLF G SE D++++I
Sbjct:    1 MDEYTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLE--NEEEGVPSTAIREISLLKELQHPNIVCLLDVLMQDSRLYLIFEFLSMDLKKYLDSIPSGQYIDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRASEVLLGSVRYSTPVDVWSVGTIFAEIATKKPLFHGDSEIDQLFRI 216          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.741e-39
Identity = 86/218 (39.45%), Postives = 137/218 (62.84%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            ME+Y  ++++G+GT+G V++A     GE  A+KK++ +K         +RE+  L+++ H NIVKL +VI     L  VFE+++ +L +L+   E        +++  Q+  G+AY H R   HRDLKP+NLL++++  +KIADFGLAR        +T  V T WYRAP+VL+ S  YS+ +D+W++G I AE++   PLFPG SEAD++ +I  ++
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAF7 (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate 3D7) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.741e-39
Identity = 86/218 (39.45%), Postives = 137/218 (62.84%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            ME+Y  ++++G+GT+G V++A     GE  A+KK++ +K         +RE+  L+++ H NIVKL +VI     L  VFE+++ +L +L+   E        +++  Q+  G+AY H R   HRDLKP+NLL++++  +KIADFGLAR        +T  V T WYRAP+VL+ S  YS+ +D+W++G I AE++   PLFPG SEAD++ +I  ++
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217          
The following BLAST results are available for this feature:
BLAST of FC873302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK3_HUMAN1.020e-3937.67Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDK10_MOUSE1.020e-3941.44Cell division protein kinase 10 OS=Mus musculus GN... [more]
CDC21_MEDSA1.020e-3939.72Cell division control protein 2 homolog 1 (Fragmen... [more]
ERK2_DICDI1.333e-3939.38Extracellular signal-regulated kinase 2 OS=Dictyos... [more]
CDK11_RAT1.333e-3939.91Cell division protein kinase 11 OS=Rattus norvegic... [more]
CDK10_RAT1.333e-3941.44Cell division protein kinase 10 OS=Rattus norvegic... [more]
CDC2H_PLAYO1.333e-3938.36Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2B_XENLA1.333e-3940.37Cell division control protein 2-B OS=Xenopus laevi... [more]
CDC2H_PLAFK1.741e-3939.45Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAF71.741e-3939.45Cell division control protein 2 homolog OS=Plasmod... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BD10FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873302 ID=FC873302; Name=FC873302; organism=Citrus clementina; type=EST; length=770bp
TTTTGTTTAAATTTAACAGTTTTTTCTAGCAATTATCTTGGTACAATAAA
TGTCGTATAACTTCAAAGGTTCTTACACTTTTCTTGAATAAAGAAAGAGC
TGTTTCTGTTCCACAAGAAAAATGGAAAGGTACAAGTTAATTAAGGAAGT
TGGTGATGGAACATTTGGGAGTGTCTGGCGAGCTATTAGTAAGCAGTCTG
GTGAAGTTGTTGCAATTAAAAAAATGAAGAAAAAATATTATTCCTGGGAG
GAGTGTGTCAATTTGAGAGAAGTTAAGTCGCTACGGAAAATGAGTCATCC
AAACATTGTGAAGCTTAAGGAAGTCATCCGGGAAAATGATATCTTGTACT
TTGTTTTTGAATACATGGAATGTAACCTTTACCAACTTATGAAAGACAGA
GAGAAGTGTTTCTCTGAAGCTGAAGTCAGAAATTGGTGTTTCCAAGTTTT
CCAAGGTCTGGCTTACATGCATCAGCGGGGATATTTTCATCGTGACCTTA
AGCCTGAGAACTTGCTTGTTTCAAAAGACACAATTAAAATTGCTGATTTT
GGTCTTGCGCGTGAAATTAATTCACGTCCACCGTTCACGGAGTATGTCTC
AACACGATGGTATCGAGCTCCTGAAGTGCTGCTCCAGTCATACCTGTATA
GCTCTAAAGTTGATATGTGGGCAATGGGTGCTATCATGGCTGAGTTGATC
ACTCTCCGCCCTCTCTTTCCGGGTACCAGCGAAGCAGATGAAATATACAA
AATATGCAGTGTAATANGCA
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