FC873302

Overview
NameFC873302
Unique NameFC873302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length770
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSJ (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.273e-39
Identity = 87/216 (40.28%), Postives = 133/216 (61.57%), Query Frame = 2
Query:  116 RKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK-KYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINS-RPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 754
            R  +RY   + +G+GT+G V++A+  ++G  VAIKK++  KY        LRE+K L+++   NI++L +       L+ VFE+ME +L  +++DR    S A+ +++   + +GLA+ H++   HRD+KP NLL+  D  +K+ADFGLAR   S    FT  V  RWYRAPE+L  +  Y S VD+WA G I AEL+  RP   G+S+ D++ KI
Sbjct:   14 RVADRYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKELKDSNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPADTKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIGADGQLKLADFGLARIFGSPERNFTHQVFARWYRAPELLFGTKQYGSAVDIWAAGCIFAELLLRRPFLQGSSDIDQLGKI 229          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.969e-39
Identity = 81/212 (38.21%), Postives = 139/212 (65.57%), Query Frame = 2
Query:  131 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKD--REKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLV-SKDTIKIADFGLAREINSRP-PFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 754
            Y+ ++++G+GT+  V++  ++ +GE+VA+K ++           +RE+  ++++ HPNI+ L +V++  + L  VFEYME +L + M     +     ++V+N+  Q+ +G+++ H+    HRDLKP+NLL+ S+  +K+ADFGLAR I      F+  V T WYRAP+VLL S +YS+ +D+W++G IMAE+ T RPLF G++  D++ KI
Sbjct:    3 YQRLEKLGEGTYAHVYKGQNRVTGEIVALKVIRIDADEGTPSTAIREISLMKELRHPNIMSLSDVLQTENKLMLVFEYMEKDLKKYMDTYGNQGALPPSQVKNFTQQLLKGISFCHENRVLHRDLKPQNLLINSRGELKLADFGLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEMATGRPLFAGSNNEDQLLKI 214          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.969e-39
Identity = 85/220 (38.64%), Postives = 132/220 (60.00%), Query Frame = 2
Query:  125 ERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQL---MKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            E ++ ++++G+GT+G V++A  + +  VVA+KK++ +          +RE+  L+ + H  IV+L +VI  N+ +Y VFEY+E +L +    M D  +   E  VR    Q+   + Y H R  FHRDLKP+N+LV  K+ IK+ADFGL R        +T  V T WYR PE+LL    Y + VD+W+   IMAE++ +RP FPG SE D++++I  V+
Sbjct:    3 ESFQKLEKIGEGTYGVVYKARERNTNRVVALKKIRLENENEGIPATTIREILLLKNLKHSTIVELSDVIYNNNKMYLVFEYVELDLRRYLDRMSDEGRLVEEGFVRKMSQQLLTAMEYCHSRNIFHRDLKPQNILVDPKENIKLADFGLGRAAGIPLRTYTTEVVTLWYRPPELLLGCKYYDASVDVWSAACIMAEVVLMRPFFPGDSEIDQLFRIFKVL 222          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MPK2_ARATH (Mitogen-activated protein kinase 2 OS=Arabidopsis thaliana GN=MPK2 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.878e-39
Identity = 90/221 (40.72%), Postives = 140/221 (63.35%), Query Frame = 2
Query:  128 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVIRENDI-----LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPF-TEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            +Y  IK +G G +G V  +++++S E VAIKK+   + +  + +  LRE+K LR + H N+V LK+V+  N       +Y V+E M+ +L+Q++K  +   S    + + FQ+ +GL Y+H     HRDLKP NLLV+ +  +KI DFGLAR  N++  F TEYV TRWYRAPE+LL    Y + +D+W++G I AEL+  +P+FPGT   ++I  I +++
Sbjct:   31 KYVPIKPIGRGAYGVVCSSVNRESNERVAIKKIHNVFENRIDALRTLRELKLLRHLRHENVVALKDVMMANHKRSFKDVYLVYELMDTDLHQIIKSSQ-VLSNDHCQYFLFQLLRGLKYIHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNTKGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPVFPGTECLNQIKLIINIL 250          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDK10_BOVIN (Cell division protein kinase 10 OS=Bos taurus GN=CDK10 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.878e-39
Identity = 90/222 (40.54%), Postives = 138/222 (62.16%), Query Frame = 2
Query:  116 RKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKK-KYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDI--LYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREINSR-PPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            R ++ ++ +  +G+GT+G V+RA    + E+VA+KK++  K        +LRE+  L ++ HPNIV+LKEV+  N +  ++ V  Y E +L  L+++    FSEA+V+    QV +GL Y+H+    HRDLK  NLL++ K  +K ADFGLAR       P T  V T WYRAPE+LL +   ++ +DMWA+G I+AEL+  +PL PGTSE  ++  I  ++
Sbjct:   32 RSVKEFEKLNRIGEGTYGIVYRARDTHTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGIPVKPMTPKVVTLWYRAPELLLGTTTQTTSIDMWAVGCILAELLAHKPLLPGTSEIHQVDLIVQLL 253          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.878e-39
Identity = 84/218 (38.53%), Postives = 137/218 (62.84%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD-TIKIADFGLAREINSRP-PFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            ME+Y  ++++G+GT+G V++A     GE  A+KK++ +K         +RE+  L+++ H NIVKL +VI     L  VFE+++ +L +L+   +        +++  Q+  G+AY H+    HRDLKP+NLL++++  +KIADFGLAR        +T  V T WYRAP++L+ S  YS+ +DMW++G I AE++  RPLFPG SE D++ +I  ++
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTAIREISILKELKHSNIVKLYDVIHTKKRLILVFEHLDQDLKKLLDVCDGGLESVTAKSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDMWSVGCIFAEMVNGRPLFPGVSETDQLMRIFRIL 217          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MPK5_ARATH (Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 5.065e-39
Identity = 85/216 (39.35%), Postives = 135/216 (62.50%), Query Frame = 2
Query:  140 IKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVIR---ENDIL--YFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            I+ +G G +G V  A+  ++ E +AIKK+ K + +  +    LRE+K LR + H N+V +K++IR   + D +  Y VFE M+ +L+Q+++  +   ++   + + +Q+ +GL Y+H     HRDLKP NLL++ +  +KI DFGLAR  +     TEYV TRWYRAPE+LL S  Y+S +D+W++G I AE++T  PLFPG     ++  I  +I
Sbjct:   46 IRPIGRGAYGFVCAAVDSETHEEIAIKKIGKAFDNKVDAKRTLREIKLLRHLEHENVVVIKDIIRPPKKEDFVDVYIVFELMDTDLHQIIRSNQS-LNDDHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNSNCDLKITDFGLARTTSETEYMTEYVVTRWYRAPELLLNSSEYTSAIDVWSVGCIFAEIMTREPLFPGKDYVHQLKLITELI 260          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MPK4_ORYSJ (Mitogen-activated protein kinase 4 OS=Oryza sativa subsp. japonica GN=MPK4 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.065e-39
Identity = 89/221 (40.27%), Postives = 140/221 (63.35%), Query Frame = 2
Query:  128 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPPF-TEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            +Y  IK +G G +G V  +I++ + E VAIKK+   + +  + +  LRE+K LR + H N++ LK+++     R    +Y V+E M+ +L+Q++K  +   S    + + FQ+ +GL Y+H  G  HRDLKP NLLV+ +  +KI DFGLAR  N++  F TEYV TRWYRAPE+LL    Y + +D+W++G I AEL+  +P+FPGT   +++  I +V+
Sbjct:   31 KYVPIKPIGRGAYGIVCSSINRATNEKVAIKKINNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKSSQP-LSNDHCQYFLFQLLRGLKYLHSAGILHRDLKPGNLLVNANCDLKICDFGLARTNNTKGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIVNVL 250          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDKL1_MOUSE (Cyclin-dependent kinase-like 1 OS=Mus musculus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.065e-39
Identity = 80/214 (37.38%), Postives = 139/214 (64.95%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK-MKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDT-IKIADFGLAREINSRPP-FTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKI 754
            ME+Y+ I ++G+G++G V++  ++ +G++VAIK+ ++ +     + + LRE++ L+++ HPN+V L EV R    L+ VFEY +  +   +   ++   E  V+N  +Q  Q + + H+    HRD+KPEN+L++K + IK+ DFG AR +      +T+YV+TRWYR+PE+L+    Y   VD+WA+G + AEL++  PL+PG S+ D++Y I
Sbjct:    1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEPLVKNITWQTLQAVNFCHKHNCIHRDVKPENILITKQSAIKLCDFGFARLLTGPGDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI 214          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDK16_MOUSE (Cell division protein kinase 16 OS=Mus musculus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.065e-39
Identity = 81/218 (37.16%), Postives = 138/218 (63.30%), Query Frame = 2
Query:  119 KMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS-KDTIKIADFGLAREIN-SRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            K+E Y  + ++G+GT+ +V++  SK +  +VA+K+++ ++     C  +REV  L+ + H NIV L ++I     L  VFEY++ +L Q + D     +   V+ + FQ+ +GLAY H++   HRDLKP+NLL++ +  +K+ADFGLAR  +     ++  V T WYR P++LL S  YS+++DMW +G I  E+ T RPLFPG++  ++++ I  ++
Sbjct:  161 KLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNVINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 378          
The following BLAST results are available for this feature:
BLAST of FC873302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKD1_ORYSJ2.273e-3940.28Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
PEF1_SCHPO2.969e-3938.21Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
CDC28_ENCCU2.969e-3938.64Probable cell division control protein 28 homolog ... [more]
MPK2_ARATH3.878e-3940.72Mitogen-activated protein kinase 2 OS=Arabidopsis ... [more]
CDK10_BOVIN3.878e-3940.54Cell division protein kinase 10 OS=Bos taurus GN=C... [more]
CDC2H_PLAVI3.878e-3938.53Cell division control protein 2 homolog OS=Plasmod... [more]
MPK5_ARATH5.065e-3939.35Mitogen-activated protein kinase 5 OS=Arabidopsis ... [more]
MPK4_ORYSJ5.065e-3940.27Mitogen-activated protein kinase 4 OS=Oryza sativa... [more]
CDKL1_MOUSE5.065e-3937.38Cyclin-dependent kinase-like 1 OS=Mus musculus GN=... [more]
CDK16_MOUSE5.065e-3937.16Cell division protein kinase 16 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BD10FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873302 ID=FC873302; Name=FC873302; organism=Citrus clementina; type=EST; length=770bp
TTTTGTTTAAATTTAACAGTTTTTTCTAGCAATTATCTTGGTACAATAAA
TGTCGTATAACTTCAAAGGTTCTTACACTTTTCTTGAATAAAGAAAGAGC
TGTTTCTGTTCCACAAGAAAAATGGAAAGGTACAAGTTAATTAAGGAAGT
TGGTGATGGAACATTTGGGAGTGTCTGGCGAGCTATTAGTAAGCAGTCTG
GTGAAGTTGTTGCAATTAAAAAAATGAAGAAAAAATATTATTCCTGGGAG
GAGTGTGTCAATTTGAGAGAAGTTAAGTCGCTACGGAAAATGAGTCATCC
AAACATTGTGAAGCTTAAGGAAGTCATCCGGGAAAATGATATCTTGTACT
TTGTTTTTGAATACATGGAATGTAACCTTTACCAACTTATGAAAGACAGA
GAGAAGTGTTTCTCTGAAGCTGAAGTCAGAAATTGGTGTTTCCAAGTTTT
CCAAGGTCTGGCTTACATGCATCAGCGGGGATATTTTCATCGTGACCTTA
AGCCTGAGAACTTGCTTGTTTCAAAAGACACAATTAAAATTGCTGATTTT
GGTCTTGCGCGTGAAATTAATTCACGTCCACCGTTCACGGAGTATGTCTC
AACACGATGGTATCGAGCTCCTGAAGTGCTGCTCCAGTCATACCTGTATA
GCTCTAAAGTTGATATGTGGGCAATGGGTGCTATCATGGCTGAGTTGATC
ACTCTCCGCCCTCTCTTTCCGGGTACCAGCGAAGCAGATGAAATATACAA
AATATGCAGTGTAATANGCA
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