FC873311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_SALHS (Spermidine synthase OS=Salmonella heidelberg (strain SL476) GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 39/91 (42.86%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 290 MWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 MW H V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 6 MWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_SALG2 (Spermidine synthase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 39/91 (42.86%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 290 MWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 MW H V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 6 MWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_SALEP (Spermidine synthase OS=Salmonella enteritidis PT4 (strain P125109) GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 39/91 (42.86%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 290 MWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 MW H V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 6 MWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_SALDC (Spermidine synthase OS=Salmonella dublin (strain CT_02021853) GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 39/91 (42.86%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 290 MWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 MW H V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 6 MWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_SALCH (Spermidine synthase OS=Salmonella choleraesuis GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 39/91 (42.86%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 290 MWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 MW H V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 6 MWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_SALAR (Spermidine synthase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 39/91 (42.86%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 290 MWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 MW H V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 6 MWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_SALA4 (Spermidine synthase OS=Salmonella agona (strain SL483) GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 39/91 (42.86%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 290 MWPGEAHS-----LKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 MW H V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 6 MWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_METJA (Probable spermidine synthase OS=Methanocaldococcus jannaschii GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 269 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEI 544 WF+E A S++V+ IL++ KS +Q + + + +GK LILD Q TERDE Y E+I+H+PL + PNP+NVLVIGGGDG + E+ Sbjct: 12 WFTEYHNN--NVALSVRVKDILYREKSGFQEIEIIDTYDFGKALILDNTFQTTERDEFIYHELISHIPLFTHPNPRNVLVIGGGDGGTVREV 101
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_EUBE2 (Spermidine synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=speE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17 Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 269 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEI 544 WFSE+ P ++VEK LF G+SDYQ + VFQS +GK L L+G + +E+D Y EM+ H+P+ P+ KNVL+IGGGDG V E+ Sbjct: 4 WFSELHS--PHVKFDIRVEKQLFSGESDYQRIDVFQSPEFGKFLTLNGSVIFSEQDCFIYNEMVVHVPMSVHPDVKNVLIIGGGDGGVSKEL 93
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_SHISS (Spermidine synthase OS=Shigella sonnei (strain Ss046) GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 36/76 (47.37%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 320 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96 The following BLAST results are available for this feature:
BLAST of FC873311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873311 ID=FC873311; Name=FC873311; organism=Citrus clementina; type=EST; length=547bpback to top |