FC873311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_ECO7I (Spermidine synthase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 36/76 (47.37%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 320 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_ECO5E (Spermidine synthase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 36/76 (47.37%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 320 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_ECO57 (Spermidine synthase OS=Escherichia coli O157:H7 GN=speE PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 36/76 (47.37%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 320 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_ECO55 (Spermidine synthase OS=Escherichia coli (strain 55989 / EAEC) GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 36/76 (47.37%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 320 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_ECO45 (Spermidine synthase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 36/76 (47.37%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 320 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_ECO27 (Spermidine synthase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 36/76 (47.37%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 320 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_ECO24 (Spermidine synthase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 36/76 (47.37%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 320 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_CITK8 (Spermidine synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17 Identity = 36/76 (47.37%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 320 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 V+ +L+ K+D+Q++++F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K+VL+IGGGDG +L E++ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVT 96
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_MOOTA (Spermidine synthase OS=Moorella thermoacetica (strain ATCC 39073) GN=speE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 269 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEI 544 WFSE+ P A S+++ + L K+ YQ + V + YG++L+LD +IQ T +DE Y EMI H+PL + PNP+ LVIGGGDG V+ EI Sbjct: 5 WFSELQT--PDLAISVRLNQTLHHEKTPYQELAVVDTEAYGRMLLLDNIIQTTVKDEFFYHEMIAHVPLNTHPNPRTALVIGGGDGGVVREI 94
BLAST of FC873311 vs. ExPASy Swiss-Prot
Match: SPEE_CLOPS (Spermidine synthase OS=Clostridium perfringens (strain SM101 / Type A) GN=speE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17 Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 290 MWPGEAH------SLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLPEIS 547 +W E H S+KV++ L+ GKSD+Q + VF+S +G LDG++ +TE+DE Y +MI H+P+ + PN KNVLVIG GDG + E++ Sbjct: 3 LWYTEEHTDKVRFSIKVDEQLYSGKSDFQRIDVFKSQEFGTFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKNVLVIGAGDGGTVRELT 94 The following BLAST results are available for this feature:
BLAST of FC873311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873311 ID=FC873311; Name=FC873311; organism=Citrus clementina; type=EST; length=547bpback to top |