FC873315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_THET2 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1757 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.450e-19 Identity = 60/170 (35.29%), Postives = 90/170 (52.94%), Query Frame = 2 Query: 308 RFIPESSEKRVPCFRVLDDNGELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAV 811 RF P + E R++ + GE + DF + E ++Y M+ +++D R G+ SF G EA + A A+ D++ P YR+ G+ L G L++ Q+ A KAD KGRQMP H GSK LN+ T++SPIA+ +P A G A S+K+ + AV Sbjct: 7 RFEPFTEEP----IRLIGEEGEWL--GDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELFGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAV 170
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODBA_THET8 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0229 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.424e-19 Identity = 56/156 (35.90%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 350 RVLDDNGELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAV 811 R++ + GE + DF + E ++Y M+ +++D R G+ SF G EA + A A+ D++ P YR+ G+ L G L++ Q+ A KAD KGRQMP H GSK LN+ T++SPIA+ +P A G A S+K+ + AV Sbjct: 17 RLIGEEGEWL--GDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAV 170
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODPA_BACST (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus stearothermophilus GN=pdhA PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18 Identity = 56/167 (33.53%), Postives = 81/167 (48.50%), Query Frame = 2 Query: 320 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYT 820 E ++ P F++L++ GE++ ++S E ++ MV +++D RQGR FY T G+EA I S AL +DFILP YR+ ++W G L Q F G Q+P + +N + I Q QA GVA LKM K A A+ YT Sbjct: 15 EKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLY----QAFLFSRGHFHGNQIP-----EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYT 172
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODPA_STAAW (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MW2) GN=pdhA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.885e-17 Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 326 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYT 820 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YT Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYT 173
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODPA_STAAS (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MSSA476) GN=pdhA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.885e-17 Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 326 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYT 820 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YT Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYT 173
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODPA_STAAN (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain N315) GN=pdhA PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.885e-17 Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 326 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYT 820 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YT Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYT 173
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODPA_STAAM (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.885e-17 Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 326 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYT 820 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YT Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYT 173
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODPA_STAAC (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain COL) GN=pdhA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.885e-17 Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 326 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYT 820 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q QA GVA++LK K+A A+ YT Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYT 173
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODPA_STAAR (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MRSA252) GN=pdhA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.294e-16 Identity = 50/165 (30.30%), Postives = 81/165 (49.09%), Query Frame = 2 Query: 326 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYT 820 ++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q P + +N ++ I Q Q GVA++LK K+A A+ YT Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQTAGVAFALKKRGKNAVAITYT 173
BLAST of FC873315 vs. ExPASy Swiss-Prot
Match: ODPA_STAES (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.111e-16 Identity = 50/165 (30.30%), Postives = 80/165 (48.48%), Query Frame = 2 Query: 326 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYT 820 ++ + ++LD++G ++ ++ E V++ MV +++D RQGR FY T G+EA + S AL ++DFILP YR+ ++W G L F KG Q P + +N ++ I Q Q GVA+ LK K+A A+ YT Sbjct: 18 TQSKFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWHGLPL----TDAFLFSRGHFKGNQFP-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGKNAVAITYT 173 The following BLAST results are available for this feature:
BLAST of FC873315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873315 ID=FC873315; Name=FC873315; organism=Citrus clementina; type=EST; length=821bpback to top |