FC873351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: GCN5_SCHPO (Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe GN=gcn5 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22 Identity = 55/138 (39.86%), Postives = 74/138 (53.62%), Query Frame = 3 Query: 15 IPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQSGLHS 428 +PGL E GW + S+ K A + L M +H +WPF +PV DVPDYYE+I+ PMDL TM R+ + Q Y + E F+ D K +F N R+YN +T YYK A RLE FQ K++ +S Sbjct: 324 VPGLMEVGWCKEMEELSK----------KPRPKPFFAVLEMLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQ-YESVEEFIRDAKYIFDNCRSYNDSNTTYYKNADRLEKFFQKKLRETEYS 450
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: GCN5_CANGA (Histone acetyltransferase GCN5 OS=Candida glabrata GN=GCN5 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22 Identity = 54/133 (40.60%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 15 IPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQ 413 IPGL+EAGWTP+ + H A ++++L + +H AWPF PV+ +VPDYYE IK+PMDL TM ++E+ + Y E F+ D + + N R YN +T YYK A RLE F +KV+ Sbjct: 415 IPGLKEAGWTPE---------MDELAQRPKRGPHYAA-IQNILVELQNHAAAWPFLRPVNKEEVPDYYEFIKEPMDLSTMELKLENNK-YEKMEEFIYDARLVCNNCRLYNGENTSYYKYANRLEKFFNNKVK 536
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: GCN5_DEBHA (Histone acetyltransferase GCN5 OS=Debaryomyces hansenii GN=GCN5 PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21 Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 3 Query: 9 EDIPGLREAGWTPDQWGHSRFRTLTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQSGLHSSTKIQQ 446 +DIPGL E+GW+ + + H FM +LL + +H AWPF PV+ +V DYY++IK+PMDL TM ++E+++ Y +F+ F+ D + +F N R+YN+ T Y+K AT+LE +K++ S + Q Sbjct: 321 KDIPGLAESGWSEE---------MDKLAQKPKRGPHYN-FMVTLLSELTNHPSAWPFSTPVNKEEVGDYYDVIKEPMDLSTMESKLENDK-YDSFDQFLYDARLIFNNCRSYNADSTTYFKNATKLEKFMNNKIKDSAEYSHFLDQ 455
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: NU301_DROME (Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21 Identity = 48/110 (43.64%), Postives = 73/110 (66.36%), Query Frame = 3 Query: 99 ASNQKHLTAF----MRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQS 416 A+N K LT+ +++L+K M H AWPF EPVD ++ PDYY++IK+PMDL+ M ++ES Y E F+ D+ ++F N R YN ++ +YKCA LES+F K+++ Sbjct: 2551 AANMKKLTSNDVEELKNLIKQMQLHKSAWPFMEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSE-FIGDMTKIFDNCRYYNPKESSFYKCAEALESYFVQKIKN 2659
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: BPTF_HUMAN (Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF PE=1 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20 Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 3 Query: 129 MRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQ 413 ++ +L+S+ H AWPF EPVD D PDYY +IK+PMDL TM +RV+ +YY FVAD+ ++F N R YN D+ +Y+CA LES F K++ Sbjct: 2936 LKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQ-RRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLK 3029
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: NU301_CAEEL (Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis elegans GN=nurf-1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 138 LLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQSGLHSSTKIQQ 446 LL+ + +H + PF+ PVD + PDY + IK PMDL T++K+VE + Y+ FV DV +MF NA+TYN +KCA ++ F K+ T QQ Sbjct: 2114 LLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTE-YLYLSQFVNDVNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLIDVREQMTARQQ 2215
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: CECR2_HUMAN (Cat eye syndrome critical region protein 2 OS=Homo sapiens GN=CECR2 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.150e-13 Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 129 MRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHF 398 M +L + H D+WPF EPVD P+YY+IIK PMD+ +M K++ Y T E FV D+K MF N R YN + Y K + LE F Sbjct: 443 MYKVLDVVKAHKDSWPFLEPVDESYAPNYYQIIKAPMDISSMEKKLNG-GLYCTKEEFVNDMKTMFRNCRKYNGESSEYTKMSDNLERCF 531
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: BRD4_MOUSE (Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13 Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 117 LTAFMRSLLKSMHDHVDAWPFKEPVDA--RDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQSGLHSSTKI 440 L +R +LK++ H AWPF++PVDA ++PDYY+IIK PMD+ T+ KR+E+ YY + + D MF N YN P A LE F K+ T+I Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLEN-NYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEI 171
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: BRD4_HUMAN (Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13 Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 117 LTAFMRSLLKSMHDHVDAWPFKEPVDA--RDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQSGLHSSTKI 440 L +R +LK++ H AWPF++PVDA ++PDYY+IIK PMD+ T+ KR+E+ YY + + D MF N YN P A LE F K+ T+I Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLEN-NYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEI 171
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: FSH_DROME (Homeotic protein female sterile OS=Drosophila melanogaster GN=fs(1)h PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 105 NQKHLTAFMRSLLKSMHDHVDAWPFKEPVDAR--DVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQS 416 N L +++++K + H +WPF++PVDA+ ++PDY++IIK PMD+ T+ KR+E+ YY + + + D MF N YN P A LE F K++S Sbjct: 35 NTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLEN-NYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIES 139 The following BLAST results are available for this feature:
BLAST of FC873351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873351 ID=FC873351; Name=FC873351; organism=Citrus clementina; type=EST; length=735bpback to top |