FC873351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: BAZ1A_MOUSE (Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus GN=Baz1a PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12 Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 3 Query: 78 LTAATDGASNQKHLTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKVQS-GLHSS 431 L + G H + L+ + H D+WPF + V VPDYY+IIK P+ L + ++V +Y + E F+ D++ MF+N YN +T K TRL++ F + Q GLH S Sbjct: 1420 LNRRSSGRQGGVHELSAFEQLVVELVRHDDSWPFLKLVSKIQVPDYYDIIKKPIALNIIREKVNKCEYKLASE-FIDDIELMFSNCFEYNPRNTSEAKAGTRLQAFFHIQAQKLGLHVS 1537
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: BRD1_HUMAN (Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 3 Query: 117 LTAFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRL 386 LT +RS+L + D A F +PV ++VPDY + IK PMD TM KR+E+ Q Y F D + N YN+ DT++Y+ A RL Sbjct: 567 LTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEA-QGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRAAVRL 655
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: BRDT_MOUSE (Bromodomain testis-specific protein OS=Mus musculus GN=Brdt PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11 Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = 3 Query: 117 LTAFMRSLLKSMHDHVDAWPFKEPVDA--RDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKV 410 L R +LK++ H +WPF++PVDA +PDYY IIK PMDL T+ KR+E+ +YY + D MF+N YN A LE F K+ Sbjct: 31 LQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEN-KYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKL 129
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: YCK2_SCHPO (Bromodomain-containing protein C1450.02 OS=Schizosaccharomyces pombe GN=SPCC1450.02 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 102 SNQKHLTAFMRSLLKSMHDHVDAWPFKEPVD--ARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSK 407 S + + ++ L K ++ A+PF +PVD A D PDY+++IK+PMDL T+ ++ + Y T E F +D+ MF N TYN P T + +LE+ F+ K Sbjct: 255 SQMRFCSTVLKELYKRQYESF-AFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNE-YSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEK 356
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: BRD3_HUMAN (Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 138 LLKSMHDHVDAWPFKEPVDA--RDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKV 410 ++K++ H AWPF +PVDA ++PDY++IIK+PMD+ T+ KR+E+ Y+ E + D MF N YN P A LE F KV Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASEC-MQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKV 137 HSP 2 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 36/101 (35.64%), Postives = 59/101 (58.42%), Query Frame = 3 Query: 111 KHLTAFMRSLLKSMHDHVDAWPFKEPVDAR--DVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSK 407 ++ + +R +L H AWPF +PVDA ++ DY++IIK PMDL T+ ++++ + Y + F ADV+ MF+N YN PD A +L+ F+ + Sbjct: 313 RYCDSILREMLSKKHAAY-AWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE-YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMR 411
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: Y3800_DICDI (Ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 3 Query: 105 NQKHLTAFMRSLLKSMHDHVDAWPFKEPVD--ARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSK 407 N+K+LT F + L+ M + F+ PVD A +PDY+++IK PMDL T+ ++++ Y T + F ADV+ MF NA TYN+ + +K A L + F K Sbjct: 518 NEKNLT-FCKGLINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYS-TIKDFAADVRLMFENALTYNADSSPVWKHAKTLLNAFDQK 618
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: TAF1_DROME (Transcription initiation factor TFIID subunit 1 OS=Drosophila melanogaster GN=Taf1 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11 Identity = 30/82 (36.59%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 165 DAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSKV 410 ++WPF +PV+ + V DYY +IK PMDL T+ K +E+ +Y+ E ++AD++ + N YN DT Y K + ++ + Q+++ Sbjct: 1613 ESWPFLKPVNKKQVKDYYTVIKRPMDLETIGKNIEAHRYHSRAE-YLADIELIATNCEQYNGSDTRYTKFSKKILEYAQTQL 1693
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: BAZ2B_HUMAN (Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens GN=BAZ2B PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11 Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 3 Query: 123 AFMRSLLKSMHDHVDAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRLESHFQSK 407 A +L M H DAWPF PV+ + VP Y ++IK PMD T+ +++ S Q Y E F DV+ +F N T+N D+ + + +F+ K Sbjct: 2067 ALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQ-YPNLETFALDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKK 2160
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: TAF1_HUMAN (Transcription initiation factor TFIID subunit 1 OS=Homo sapiens GN=TAF1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11 Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 165 DAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRL 386 D+WPF PV+ + VPDYY++I +PMDL T+ K + S+ Y + E F+ DV + AN+ YN P++ Y K A + Sbjct: 1524 DSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNI-SKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEI 1596
BLAST of FC873351 vs. ExPASy Swiss-Prot
Match: TAF1_MOUSE (Transcription initiation factor TFIID subunit 1 OS=Mus musculus GN=Taf1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 165 DAWPFKEPVDARDVPDYYEIIKDPMDLRTMSKRVESEQYYVTFEMFVADVKRMFANARTYNSPDTIYYKCATRL 386 D+WPF PV+ + VPDYY++I PMDL T+ K + S+ Y + E F+ DV + AN+ YN P++ Y K A + Sbjct: 1545 DSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNI-SKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEI 1617 The following BLAST results are available for this feature:
BLAST of FC873351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873351 ID=FC873351; Name=FC873351; organism=Citrus clementina; type=EST; length=735bpback to top |