FC873354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD2_HORVU (Defender against cell death 2 OS=Hordeum vulgare GN=DAD2 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 9.226e-47 Identity = 96/115 (83.48%), Postives = 101/115 (87.83%), Query Frame = 3 Query: 18 MARSTGKDAQALFHSLRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 362 M ++ G DA+ L SL AYAATPT LKIIDLYV FAV TAL+QVVYM IVGSFPFNSFLSGVLS +GTAVL VCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG Sbjct: 1 MPKAAG-DAKLLIQSLNKAYAATPTNLKIIDLYVVFAVATALVQVVYMGIVGSFPFNSFLSGVLSSIGTAVLGVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 114
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD1_HORVU (Defender against cell death 1 OS=Hordeum vulgare GN=DAD1 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 4.579e-46 Identity = 95/115 (82.61%), Postives = 101/115 (87.83%), Query Frame = 3 Query: 18 MARSTGKDAQALFHSLRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 362 M ++ G DA+ L SL AYAATPT LKIIDLYV FAV TAL+QVVYM IVGSFPFNSFLSGVLSC+GTAVLAVC RIQVNKDNKEFKDL PERAFADFVLC+LVLHLVIMNFLG Sbjct: 1 MPKAAG-DAKLLIQSLNKAYAATPTNLKIIDLYVVFAVVTALLQVVYMGIVGSFPFNSFLSGVLSCIGTAVLAVCHRIQVNKDNKEFKDLAPERAFADFVLCSLVLHLVIMNFLG 114
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD1_MAIZE (Defender against cell death 1 (Fragment) OS=Zea mays GN=DAD1 PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 3.289e-36 Identity = 74/79 (93.67%), Postives = 76/79 (96.20%), Query Frame = 3 Query: 126 AVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 362 AV TALIQV YM +VGSFPFNSFLSGVLSC+GTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG Sbjct: 1 AVATALIQVAYMGLVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 79
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD1_BOVIN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Bos taurus GN=DAD1 PE=3 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.172e-25 Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 63 LRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNK-EFKDLPPERAFADFVLCNLVLHLVIMNFLG 362 L +ATP LK++D Y+ + + T +Q Y +VG+FPFNSFLSG +SCVG+ +LAVCLRIQ+N NK +F+ + PERAFADF+ + +LHLV+MNF+G Sbjct: 13 LEEYLSATPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFISCVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFASTILHLVVMNFVG 113
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD1_RAT (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus GN=Dad1 PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 2.612e-25 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 63 LRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNK-EFKDLPPERAFADFVLCNLVLHLVIMNFLG 362 L ++TP LK++D Y+ + + T +Q Y +VG+FPFNSFLSG +SCVG+ +LAVCLRIQ+N NK +F+ + PERAFADF+ + +LHLV+MNF+G Sbjct: 13 LEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFISCVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFASTILHLVVMNFVG 113
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD1_PIG (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Sus scrofa GN=DAD1 PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 2.612e-25 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 63 LRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNK-EFKDLPPERAFADFVLCNLVLHLVIMNFLG 362 L ++TP LK++D Y+ + + T +Q Y +VG+FPFNSFLSG +SCVG+ +LAVCLRIQ+N NK +F+ + PERAFADF+ + +LHLV+MNF+G Sbjct: 13 LEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFISCVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFASTILHLVVMNFVG 113
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD1_MOUSE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Mus musculus GN=Dad1 PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 2.612e-25 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 63 LRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNK-EFKDLPPERAFADFVLCNLVLHLVIMNFLG 362 L ++TP LK++D Y+ + + T +Q Y +VG+FPFNSFLSG +SCVG+ +LAVCLRIQ+N NK +F+ + PERAFADF+ + +LHLV+MNF+G Sbjct: 13 LEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFISCVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFASTILHLVVMNFVG 113
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD1_MESAU (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Mesocricetus auratus GN=DAD1 PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 2.612e-25 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 63 LRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNK-EFKDLPPERAFADFVLCNLVLHLVIMNFLG 362 L ++TP LK++D Y+ + + T +Q Y +VG+FPFNSFLSG +SCVG+ +LAVCLRIQ+N NK +F+ + PERAFADF+ + +LHLV+MNF+G Sbjct: 13 LEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFISCVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFASTILHLVVMNFVG 113
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD1_HUMAN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Homo sapiens GN=DAD1 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 2.612e-25 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 63 LRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNK-EFKDLPPERAFADFVLCNLVLHLVIMNFLG 362 L ++TP LK++D Y+ + + T +Q Y +VG+FPFNSFLSG +SCVG+ +LAVCLRIQ+N NK +F+ + PERAFADF+ + +LHLV+MNF+G Sbjct: 13 LEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFISCVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFASTILHLVVMNFVG 113
BLAST of FC873354 vs. ExPASy Swiss-Prot
Match: DAD1_DROME (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Drosophila melanogaster GN=CG13393 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.411e-25 Identity = 52/94 (55.32%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 84 TPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDNKE-FKDLPPERAFADFVLCNLVLHLVIMNFLG 362 TP LK++D+Y+G+ + T +IQ VY +VG+FPFNSFLSG +S V VLAVCLR+Q N NK F + PER FADF+ +++LHLV+MNF+G Sbjct: 19 TPKKLKLVDIYLGYILLTGIIQFVYCCLVGTFPFNSFLSGFISTVSCFVLAVCLRLQANPQNKSVFAGISPERGFADFIFAHVILHLVVMNFIG 112 The following BLAST results are available for this feature:
BLAST of FC873354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873354 ID=FC873354; Name=FC873354; organism=Citrus clementina; type=EST; length=600bpback to top |