FC873355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_DESOH (10 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.621e-14 Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 P R+LV+++ +KT GI++P+ K I GKV+AVG G +GK IP+ VK+GD VL +YGG EVK+ ++Y + ++ ILG L Sbjct: 5 PLHDRILVKRVEEETKTKGGIIIPDTAKEKPIEGKVMAVGNGRLGEDGKLIPLEVKKGDRVLFGKYGGTEVKMDGQEYLIMREDDILGIL 94
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_HOLOB (10 kDa chaperonin OS=Holospora obtusa GN=groS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.912e-13 Identity = 36/90 (40.00%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 P R+LV+++ +T+ GI++P+ K I G V+AVGPGARD G I + VK+GD VL ++ G EVKL + Y + ++ + GT+ Sbjct: 6 PLGDRILVKRVEAEERTSGGIVIPDTAKEKPIEGTVIAVGPGARDPQGNLIALEVKQGDRVLFGKWSGTEVKLSGEDYIVMKESDVFGTI 95
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH102_BRAJA (10 kDa chaperonin 2 OS=Bradyrhizobium japonicum GN=groS2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.109e-13 Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTSKLIS-GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLHD 333 P RV+V++I KT GI++P+ + S G+V+AVGPG RD +GK IP+ V+ GD VL ++ G EVK+ ++ + ++ I+G L D Sbjct: 5 PLHDRVVVKRIDAEEKTAGGIIIPDTVKEKPSQGEVIAVGPGGRDESGKLIPIDVRVGDRVLFGKWSGTEVKIDTQELLIMKESDIMGVLAD 96
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH102_RHOPA (10 kDa chaperonin 2 OS=Rhodopseudomonas palustris GN=groS2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.673e-13 Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTSKLIS-GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLHD 333 P RV+V++I KT GI++P+ + S G++VAVGPG RD GK IP+ +K GD VL ++ G EVK+ K+ + ++ I+G + D Sbjct: 5 PLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEIVAVGPGGRDEAGKLIPIDLKVGDRVLFGKWSGTEVKIDGKELLIMKESDIMGVITD 96
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_OPITP (10 kDa chaperonin OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.138e-12 Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 52 RLIPAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 ++ P RVLV+ I + GI++P+ K KV+A+G G + +GK P VK GD VL+ +YGG EVKL +KKY L ++ ILG + Sbjct: 5 KIKPIGDRVLVQHIEEKEQVRGGIIIPDSAKEKPQEAKVIALGTGKKGEDGKVTPFEVKVGDRVLISKYGGTEVKLDEKKYTLVREDDILGVI 97
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_STACT (10 kDa chaperonin OS=Staphylococcus carnosus (strain TM300) GN=groS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.487e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 55 LIPAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESIL 318 L P +RV+++++ T SGI+L EK K GKV+AVGPG NG+ + VKEGDTV+ +Y G+EV++G+ KY + +E +L Sbjct: 2 LKPLGNRVIIKRVESEQTTKSGIVLTEKAKEKSNEGKVIAVGPGRLLDNGERVTPEVKEGDTVVFEQYAGSEVQVGEDKYLVISEEEVL 90
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_PELUB (10 kDa chaperonin OS=Pelagibacter ubique GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.536e-12 Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 321 P RVL+E + KT GI++P+ K GKV+AVG GA+ +GK IP+ VK GD VL ++ G E+K+ K+Y + ++ I+G Sbjct: 5 PLHDRVLIEVLDSSEKTAGGIIIPDTAQEKPQEGKVIAVGGGAKTEDGKLIPMDVKVGDKVLFGKWSGTEIKIDGKEYSIMKESDIMG 92
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_DESAH (10 kDa chaperonin OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.536e-12 Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 55 LIPAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 L P R+LVE++ KT GI++P+ K GKVVA G G +GK IP+ +K GDT+L +YGG EVK+ Y + + +LG + Sbjct: 3 LRPLQDRILVERVQETEKTKGGIIIPDTAKEKPAEGKVVASGNGRVGEDGKLIPMDLKVGDTILFSKYGGTEVKIDGTDYLIMRQDDVLGVI 94
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH101_RHOPA (10 kDa chaperonin 1 OS=Rhodopseudomonas palustris GN=groS1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.536e-12 Identity = 35/90 (38.89%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 P RV+V++I +KT GI++P+ K G+V+AVGPG RD GK P+ VK GD VL ++ G E+KL ++ + ++ I+G + Sbjct: 8 PLHDRVVVKRIDAETKTKGGIIIPDSAKEKPQEGQVIAVGPGGRDETGKLTPIDVKVGDRVLFGKWSGTEIKLDGEELLIMKESDIMGVV 97
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_BEII9 (10 kDa chaperonin OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12 Identity = 34/90 (37.78%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 P RV+V+++ KT GI++P+ K G+++AVGPG RD +GK IP+ VK GD +L ++ G EVK+ + + ++ ILG + Sbjct: 5 PLHDRVVVKRLESEEKTKGGIIIPDSAKEKPQEGEIIAVGPGGRDESGKLIPLDVKAGDKILFGKWSGTEVKIDGQDLLIMKESDILGVV 94 The following BLAST results are available for this feature:
BLAST of FC873355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873355 ID=FC873355; Name=FC873355; organism=Citrus clementina; type=EST; length=599bpback to top |