FC873355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_BRUC2 (10 kDa chaperonin OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 321 P RV+V ++ +KT GI++P+ K G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG Sbjct: 8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_BRUAB (10 kDa chaperonin OS=Brucella abortus GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 321 P RV+V ++ +KT GI++P+ K G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG Sbjct: 8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_BRUA2 (10 kDa chaperonin OS=Brucella abortus (strain 2308) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 321 P RV+V ++ +KT GI++P+ K G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG Sbjct: 8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_BRUA1 (10 kDa chaperonin OS=Brucella abortus (strain S19) GN=groS PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 321 P RV+V ++ +KT GI++P+ K G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG Sbjct: 8 PLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILG 95
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH105_RHILO (10 kDa chaperonin 5 OS=Rhizobium loti GN=groS5 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 43 MAK-RLIPAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 MAK + P RV+V ++ SKT GI++P+ K G+++AVG GARD GK +P+ VK GD +L ++ G EVKL + + ++ I+G + Sbjct: 1 MAKSKFRPLHDRVVVRRVESESKTAGGIIIPDTAKEKPQEGEIIAVGSGARDEAGKLVPLDVKAGDRILFGKWSGTEVKLNGEDLLIMKESDIMGII 97
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_DESPS (10 kDa chaperonin OS=Desulfotalea psychrophila GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.644e-11 Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 52 RLIPAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 ++ P R+LV+++ KT GI++P+ K G+VVAVGPG +G+ + + VKEGD VL +YGG +VKL + + + ++ ILG + Sbjct: 2 KIRPLNDRLLVKRLAEEEKTAGGIIIPDSAKEKPAEGQVVAVGPGKVSDSGERVALQVKEGDLVLFSKYGGTDVKLDGEDFLIMREDDILGIM 94
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH103_RHILO (10 kDa chaperonin 3 OS=Rhizobium loti GN=groS3 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.644e-11 Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 55 LIPAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 L P RV+V ++ SKT GI++P+ K G+++AVG GARD GK +P+ VK GD +L ++ G EVKL + + ++ I+G + Sbjct: 6 LRPLHDRVVVRRVESESKTAGGIIIPDTAKEKPQEGEIIAVGSGARDEAGKLVPLDVKAGDRILFGKWSGTEVKLNGEDLLIMKEADIMGII 97
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_PARL1 (10 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.147e-11 Identity = 35/90 (38.89%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTSKLIS-GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 P RV+V ++ SKT GI++P+ + S G+VVAVGPGAR +GK + + VK GD V+ ++ G EVK+ ++ + ++ I+G L Sbjct: 5 PLHDRVVVRRVEEESKTAGGIIIPDSAQEKPSQGEVVAVGPGARGDDGKLVALDVKVGDRVIFGKWSGTEVKIDGEELLIMKESDIMGVL 94
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH10_METSB (10 kDa chaperonin OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.147e-11 Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 P RV+V+++ KT GI++P+ K G+++AVGPG RD +GK P+ VK GD VL ++ G EVK+ + + ++ ILG + Sbjct: 5 PLHDRVVVKRLEGEEKTKGGIIIPDTAKEKPQEGEIIAVGPGGRDDSGKLTPLDVKAGDKVLFGKWSGTEVKIDGQDLLIMKESDILGVV 94
BLAST of FC873355 vs. ExPASy Swiss-Prot
Match: CH101_RHIME (10 kDa chaperonin 1 OS=Rhizobium meliloti GN=groS1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.147e-11 Identity = 33/90 (36.67%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 61 PAFSRVLVEKIIPPSKTNSGILLPEKTS-KLISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 327 P RV+V ++ KT GI++P+ K G++VAVG GARD +GK +P+ VK GD +L ++ G EVK+ + + ++ I+G + Sbjct: 8 PLHDRVVVRRVESEEKTKGGIIIPDTAKEKPQEGEIVAVGSGARDESGKVVPLDVKAGDRILFGKWSGTEVKINGEDLLIMKEADIMGVI 97 The following BLAST results are available for this feature:
BLAST of FC873355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873355 ID=FC873355; Name=FC873355; organism=Citrus clementina; type=EST; length=599bpback to top |