FC873364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_SCHPO (Probable eukaryotic translation initiation factor 2 subunit beta OS=Schizosaccharomyces pombe GN=tif212 PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 1.116e-41 Identity = 107/262 (40.84%), Postives = 133/262 (50.76%), Query Frame = 2 Query: 20 PQAVSDGREDLSFDSRNSTMTDENQVDVKDEVAELAPFDPTXXXXXXXVVIQDPSDDSVDKLAEITETLSVSEGLESTFTGLXXXXXXP-------VESSLLNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 784 P+A S G D R S+ D + EV EL + + S S E TE ++ G E F+ + E L GDA DL + + + W SDRDY Y ELL R F +LR NNPELAG++R+ + PP V REG KKT+F N D+ K MHR DHV+ FL AELGTSGS+DG RL++KGRF K E +LRRY+ EYV C CKSPDTIL+KEN Sbjct: 42 PEASSAGATDEDDSERKSSAKDLTTPVTEGEVDELKDMFSSMKK-------KKKSKKSSASAEEQTEDITTESG-ELDFSSMKKKKKKKKSADLSAFEKELEASSTGDATSDLSKQTFDSENMG-------EHAWLKSDRDYYYPELLNRFFTLLRTNNPELAGEKRKYTIVPPSVHREG-KKTIFANISDISKRMHRSLDHVIQFLFAELGTSGSVDGSSRLIIKGRFQQKQIENVLRRYIVEYVTCKTCKSPDTILTKEN 287
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_DICDI (Eukaryotic translation initiation factor 2 subunit 2 OS=Dictyostelium discoideum GN=eif2s2 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.045e-39 Identity = 70/140 (50.00%), Postives = 105/140 (75.00%), Query Frame = 2 Query: 365 ADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 784 +DG + PW G+DRDY+Y EL R++++L+ NNP+L D++RT M+PPQV+REGTKKT++ NF ++C T++R+ +HV ++ AELGT+GS+DG QRLV++GRF E ++R Y++EYV C CKSP+T+L + N Sbjct: 144 SDGDTFVQGTIPWAGTDRDYKYSELTYRIYHLLQANNPDLISDQKRT-MKPPQVMREGTKKTIWANFAEICGTLNRKVEHVYNYVFAELGTNGSIDGNQRLVIRGRFKTSQIEIVIRHYISEYVACRNCKSPNTVLERNN 282
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_CAEEL (Eukaryotic translation initiation factor 2 subunit 2 OS=Caenorhabditis elegans GN=K04G2.1 PE=3 SV=4) HSP 1 Score: 144.821 bits (364), Expect = 5.022e-34 Identity = 63/126 (50.00%), Postives = 94/126 (74.60%), Query Frame = 2 Query: 404 EGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 +G+ DY YEE L V+ ++++ NP+ AGD+++ ++ P+V R G+KKT F NF+++C+ M RQ HV+ FLLAELGT+GS+DG L+VKGR+ K FE +LR+Y+ EYV+C CKSP+T L+K+ Sbjct: 81 KGAWPDYTYEEALTLVYQVMKDKNPDFAGDKKKFAIKLPEVARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLAELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQLTKD 206
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_YEAST (Eukaryotic translation initiation factor 2 subunit beta OS=Saccharomyces cerevisiae GN=SUI3 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.599e-32 Identity = 69/120 (57.50%), Postives = 86/120 (71.67%), Query Frame = 2 Query: 428 YEELLGRVFNILRENNPELAGDRRRTVMR--PPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 Y ELL R FNILR NNPELAGDR R PP LR+G KKT+F N D+ + +HR P+H++ +L AELGTSGS+DGQ+RLV+KG+F K E +LRRY+ EYV C CKS +T L +E Sbjct: 131 YSELLSRFFNILRTNNPELAGDRSGPKFRIPPPVCLRDG-KKTIFSNIQDIAEKLHRSPEHLIQYLFAELGTSGSVDGQKRLVIKGKFQSKQMENVLRRYILEYVTCKTCKSINTELKRE 249
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_METKA (Translation initiation factor 2 subunit beta OS=Methanopyrus kandleri GN=eif2b PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.468e-17 Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 2 Query: 419 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 784 +Y+YEELL R + E PE + RR M P+V EG K TV NF ++ K + R P+H+ + L ELGT+G +DG RL++ G + PK E L+ YV E+V+C C PDT L +E+ Sbjct: 3 EYDYEELLERAY----EQLPEEVLEDRRFEMPKPKVSVEG-KTTVIRNFKEISKKLDRDPEHITKYFLKELGTAGHVDG-GRLILHGVYHPKLVEEELKNYVEEFVLCPECGKPDTKLVRED 118
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_THEGJ (Translation initiation factor 2 subunit beta OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eIF2B PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.516e-17 Identity = 43/121 (35.54%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 422 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 784 Y++E LL + + E PE + PP V+ +T+ NF+D+ + M+R P H++ F+L E+ T+G+L+G +R++++GRF P L++Y+ EYVIC C SPDT + K + Sbjct: 8 YDFERLLDKAY----EELPENVKSHKSRFEVPPAVVTIAGNRTIIENFVDIAEAMNRDPSHLLKFILREVATAGTLEG-RRVILQGRFTPYLIANKLKKYLKEYVICPVCGSPDTKIIKRD 123
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_PYRHO (Translation initiation factor 2 subunit beta OS=Pyrococcus horikoshii GN=eif2b PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.769e-16 Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 422 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 784 Y+YE+LL + + L EN + + R + V EG K T+ NF D+ + ++R P H++ FLL E+ T+G+L+G +R+V++GRF P L++Y+ EYVIC C SPDT + K + Sbjct: 6 YDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQHLLKFLLREIATAGTLEG-KRVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKRD 121
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_PYRFU (Translation initiation factor 2 subunit beta OS=Pyrococcus furiosus GN=eif2b PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.723e-16 Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 422 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 784 Y+YE+LL + + L EN + + R + V EG K T+ NF D+ ++R P H++ FLL E+ T+G+L+G +R+V++GRF P L++Y+ EYVIC C SPDT + K + Sbjct: 6 YDYEKLLEKAYQELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIADALNRDPQHLLKFLLREIATAGTLEG-RRVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKRD 121
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_PYRAB (Translation initiation factor 2 subunit beta OS=Pyrococcus abyssi GN=eif2b PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.723e-16 Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 422 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 784 Y+YE+LL + + L EN + + R + V EG K T+ NF D+ + ++R P H++ FLL E+ T+G+L+G +R+V++GRF P +++Y+ EYVIC C SPDT + K + Sbjct: 6 YDYEKLLEKAYEELPEN---VKHHKSRFEVPGALVTIEGNK-TIIENFKDIAEALNRDPQHLLKFLLREIATAGTLEG-KRVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRD 121
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_HALMA (Translation initiation factor 2 subunit beta OS=Haloarcula marismortui GN=eif2B PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.052e-15 Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 2 Query: 425 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 EY+++L R E PE+ G R + P + +EG TV+ NF C + R+ DHVM FL +LGTSG +D R+ + G F E + YV+E+V+C C PDT L +E Sbjct: 2 EYDDMLDRAM----EETPEIDGTSERFEVPDPDIRQEGNV-TVYENFQSTCSRLGREDDHVMKFLQNDLGTSGHIDESGRVRLTGEFDATRIEASIDEYVDEFVLCSECGLPDTQLERE 115 The following BLAST results are available for this feature:
BLAST of FC873364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873364 ID=FC873364; Name=FC873364; organism=Citrus clementina; type=EST; length=786bpback to top |