FC873364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_METS3 (Translation initiation factor 2 subunit beta OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=eIF2B PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.425e-12 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 2 Query: 425 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKEN 784 EYE LL R + L PE+ +R + + ++ +T NF D+ + ++R P HV+ FLL ELGT+G+L+G R +++G+F L YV +YVIC C PDT + +E+ Sbjct: 3 EYENLLNRAIDQLP---PEVFEHKRFKIPKAYSDIQGN--RTFIKNFKDVAEDLNRDPQHVLKFLLRELGTAGNLEG-SRAILQGKFTHYLINERLEDYVEKYVICHECNRPDTKIIRED 116
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_SULSO (Translation initiation factor 2 subunit beta OS=Sulfolobus solfataricus GN=eif2b PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.403e-12 Identity = 39/119 (32.77%), Postives = 63/119 (52.94%), Query Frame = 2 Query: 425 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 EY E+L R+++ L E G + T P ++ T+ NF + C + R+ M +LL EL G++D + LV++G+F+ + ++ R++ YV C CKS DTIL KE Sbjct: 6 EYVEMLDRLYSKLPEK-----GRKEGTQSLPNMIILNIGNTTIIRNFAEYCDRIRREDKICMKYLLKELAAPGNVDDKGELVIQGKFSSQVINTLMERFLKAYVECSTCKSLDTILKKE 119
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_METVS (Translation initiation factor 2 subunit beta OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=eIF2B PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.057e-12 Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 2 Query: 422 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 ++Y+ELL R R PE+ R + EG + T+ NF D+ K M R F++ ELGT+G ++G RL+++G+F + ++ YVNEYV+C C PDT + KE Sbjct: 5 FDYKELLKRA----RSQLPEVVFSDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDTHEFAKFVMKELGTAGDMEGN-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIIKE 118
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_PICTO (Translation initiation factor 2 subunit beta OS=Picrophilus torridus GN=eif2b PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.217e-12 Identity = 39/120 (32.50%), Postives = 63/120 (52.50%), Query Frame = 2 Query: 419 DYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSK 778 +++Y +LL R +L + R + P V+ EG K T+ NF+D+ + M+R P+ V+ +L E G L GQ RL++ + + + + Y+ YVIC CKSPDT + K Sbjct: 2 NFDYNKLLERASGVLSSKTK----NESRLKIPEPDVIYEG-KSTIIRNFIDITEMMNRDPEDVIKYLTKEFGIGAVLSGQ-RLIINRKVSEDEIQSKMNEYMATYVICYECKSPDTEIQK 115
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_METMP (Translation initiation factor 2 subunit beta OS=Methanococcus maripaludis GN=eif2b PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.204e-11 Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 2 Query: 422 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 ++Y LL R RE PE R + EG + T+ NF D+ K M R P +++ ELGT+G ++G RL+++G+F + ++ YVNEYV+C C PDT + KE Sbjct: 5 FDYSSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDPQEFAKYVMKELGTAGDMEGV-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKE 118
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_METM7 (Translation initiation factor 2 subunit beta OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=eIF2B PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.204e-11 Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 2 Query: 422 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 ++Y LL R RE PE R + EG + T+ NF D+ K M R P +++ ELGT+G ++G RL+++G+F + ++ YVNEYV+C C PDT + KE Sbjct: 5 FDYNSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDPQEFAKYVMKELGTAGDMEGV-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKE 118
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_METM6 (Translation initiation factor 2 subunit beta OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=eIF2B PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.204e-11 Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 2 Query: 422 YEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 ++Y LL R RE PE R + EG + T+ NF D+ K M R P +++ ELGT+G ++G RL+++G+F + ++ YVNEYV+C C PDT + KE Sbjct: 5 FDYNSLLTRA----REQLPEEVFKDVRFEIPSADSFVEGNR-TIIKNFKDIAKFMERDPQEFAKYVMKELGTAGDMEGV-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKE 118
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_HALSA (Translation initiation factor 2 subunit beta OS=Halobacterium salinarium GN=eif2b PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 42/119 (35.29%), Postives = 56/119 (47.06%), Query Frame = 2 Query: 425 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 +YEE L R + P++ G R + P V +EG TV+ NF + R DHV+ FL E+GTS S+D R + G F + L YV YV C C PDT L + Sbjct: 2 DYEEQLDRAM----DEKPDVTGSETRFEVPDPNVRKEGNV-TVYENFQATLDALSRTQDHVLKFLQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETD 115
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_HALS3 (Translation initiation factor 2 subunit beta OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eIF2B PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 42/119 (35.29%), Postives = 56/119 (47.06%), Query Frame = 2 Query: 425 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 +YEE L R + P++ G R + P V +EG TV+ NF + R DHV+ FL E+GTS S+D R + G F + L YV YV C C PDT L + Sbjct: 2 DYEEQLDRAM----DEKPDVTGSETRFEVPDPNVRKEGNV-TVYENFQATLDALSRTQDHVLKFLQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETD 115
BLAST of FC873364 vs. ExPASy Swiss-Prot
Match: IF2B_METTH (Translation initiation factor 2 subunit beta OS=Methanobacterium thermoautotrophicum GN=eif2b PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 41/119 (34.45%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 425 EYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKE 781 +YE+LL R + L PE+ +R V + V++ +T NF ++ ++R P H++ FLL ELGT+G+L+G R +++G+F + YVN++VIC C PDT + +E Sbjct: 3 DYEKLLERAIDQLP---PEVFETKRFEVPKAYSVIQGN--RTFIQNFREVADALNRDPQHLLKFLLRELGTAGNLEG-GRAILQGKFTHFLINERIEDYVNKFVICHECNRPDTRIIRE 115 The following BLAST results are available for this feature:
BLAST of FC873364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873364 ID=FC873364; Name=FC873364; organism=Citrus clementina; type=EST; length=786bpback to top |