FC873378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_LEIBR (Probable citrate synthase, mitochondrial OS=Leishmania braziliensis GN=LbrM18_V2.0760 PE=3 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 6.526e-72 Identity = 149/284 (52.46%), Postives = 180/284 (63.38%), Query Frame = 3 Query: 3 GIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKG-IHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIP--KDDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDE--------CGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRYTCQR 815 GIRFR +IPECQ++LP A TG+VP+ EQ L+ EL RA KAI ALP + HPMT F+ GV+ALQ S+F AY G +K+ YWE EDSL+++AR P VAA +Y R+ K + + LD+ NFS+MLGF D + E MRLY++IH DHEGGNVSAHT LVASALSDPYL+F+A LNGLAGPLHGLANQEVL ++ S+ D C E L Y W+ LNSGQVVPG+GH VLRK DPRYTC R Sbjct: 82 GIRFRNRTIPECQEVLPKAPNGCETLPEAMFWLLMTGEVPTAEQARALNAELHRRADPVAIAAAQKAIAALPASTHPMTAFSVGVLALQTYSKFAAAYATGKSNKTTYWEYALEDSLDMLARTPAVAAMIYNRVTKGRAEVAASSNSELDWAANFSNMLGFKDNEFWECMRLYLSIHVDHEGGNVSAHTTTLVASALSDPYLAFSAGLNGLAGPLHGLANQEVLKYLLSMQDRVKADGVNVCDEAALEVALTKYTWELLNSGQVVPGYGHAVLRKVDPRYTCLR 365
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_TETTH (Citrate synthase, mitochondrial OS=Tetrahymena thermophila PE=1 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.361e-69 Identity = 132/274 (48.18%), Postives = 181/274 (66.06%), Query Frame = 3 Query: 3 GIRFRGLSIPECQKLLPAAKP------DXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKG-IHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRY 803 GI FRG +IP+ ++ LP A P + TG++P+ QVD L E ++R TV I LP H MT + ++ LQ S+F + Y++G I K YWEP YEDS++LIA++P VAA +Y+ Y+D K+I D LD+ GN++HM+GF+ + E +R Y++IH DHEGGNVSAHT HLV SALSDPYLS++A +NGLAGPLHGLANQEVL W+ ++E G V+ + ++DYV ++SG+VVPG+GH VLR TDPR+ Sbjct: 83 GIIFRGYTIPQLKEFLPKADPKAADQANQEPLPEGIFWLLMTGQLPTHAQVDALKHEWQNRGTVNQDCVNFILNLPKDLHSMTMLSMALLYLQKDSKFAKLYDEGKISKKDYWEPFYEDSMDLIAKIPRVAAIIYRHKYRDSKLIDSDSKLDWAGNYAHMMGFEQHVVKECIRGYLSIHCDHEGGNVSAHTTHLVGSALSDPYLSYSAGVNGLAGPLHGLANQEVLKWLLQFIEEKGTKVSDKDIEDYVDHVISSGRVVPGYGHAVLRDTDPRF 356
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: PRPC_EMENI (2-methylcitrate synthase, mitochondrial OS=Emericella nidulans GN=mcsA PE=1 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.468e-65 Identity = 127/271 (46.86%), Postives = 176/271 (64.94%), Query Frame = 3 Query: 3 GIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPK-DDSLDYGGNFSHMLG---FDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRY 803 GIRF G +I +CQK LP TG+VPS QV SK+L + + +PD++ + P HPMTQ + AL +S+F + YEKGI+K+ YWEPT++D+++L+A++P VAA V++ D K D + D+ NF+ +LG ++ +L+RLY+ +H DHEGGNVSAH HLV SALSDP+LS++A L GLAGPLHGLA QEVL WI ++ ++ G T E ++ Y+W TL SG+VVPG+GHGVLRK DPR+ Sbjct: 86 GIRFHGKTIKDCQKELPKGPTGTEMLPEAMFWLLLTGEVPSTSQVRAFSKQLAEESHLPDHILDLAKSFPKHMHPMTQISIITAALNTESKFAKLYEKGINKADYWEPTFDDAISLLAKIPRVAALVFRPNEIDVVGRQKLDPAQDWSYNFAELLGKGGANNADFHDLLRLYLALHGDHEGGNVSAHATHLVGSALSDPFLSYSAGLLGLAGPLHGLAAQEVLRWILAMQEKIGTKFTDEDVRAYLWDTLKSGRVVPGYGHGVLRKPDPRF 356
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY3_YEAST (Citrate synthase 3 OS=Saccharomyces cerevisiae GN=CIT3 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.844e-56 Identity = 123/291 (42.27%), Postives = 167/291 (57.39%), Query Frame = 3 Query: 3 GIRFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXX-TGKVPSKEQVDGLSKELRDRAT-VPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKG-IHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPK-DDSLDYGGNFSHMLGFDDPK---------------MLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 818 GI+F+GL+I ECQ LP D TG VP+ +Q KEL R +P Y K + +LP HPMTQ A G+ ++ S F Y+KG I K ++W+ T EDSLNLIA +P++ +Y I +G + + + +D+ N +LG + + LMRLY IH DHEGGNVSAHT HLV SALSDPYLS+++ + GLAGPLHGLA QEV+ ++ + +++KDY+WK LNS +V+PG+GH VLRK DPR+T E Sbjct: 86 GIKFQGLTIEECQNRLPNTGIDGDNFLPESMLWLLMTGGVPTFQQAASFRKELAIRGRKLPHYTEKVLSSLPKDMHPMTQLAIGLASMNKGSLFATNYQKGLIGKMEFWKDTLEDSLNLIASLPLLTGRIYSNITNEGHPLGQYSEEVDWCTNICSLLGMTNGTNSSNTCNLTSQQSLDFINLMRLYTGIHVDHEGGNVSAHTTHLVGSALSDPYLSYSSGIMGLAGPLHGLAAQEVVRFLIEMNSNISSIAREQEIKDYLWKILNSNRVIPGYGHAVLRKPDPRFTAMLE 376
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_SYNY3 (Citrate synthase OS=Synechocystis sp. (strain PCC 6803) GN=gltA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.631e-22 Identity = 71/232 (30.60%), Postives = 118/232 (50.86%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD--DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 GK+P++ +++ E+R + ++ + P T HPM + AL + + + KY + L+A++P + A + I + I +D LDY NF +ML DP ++ + +T+H++H N S + + AS L+DPY A+A+ LAGPLHG AN+EVL ++++E G + E ++ YV K L + Q + GFGH V + DPR Sbjct: 61 GKLPTQAEIEEFEYEIRTHRRIKYHIRDMMKCFPETGHPMDALQTSAAALGLFYA-----RRALDDPKYIRAAV---VRLLAKIPTMVA-AFHMIREGNDPIQPNDKLDYASNFLYMLTEKEPDPFAAKVFDVCLTLHAEHTM-NASTFSARVTASTLTDPYAVVASAVGTLAGPLHGGANEEVL----NMLEEIG---SVENVRPYVEKCLANKQRIMGFGHRVYKVKDPR 275
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_CORGL (Citrate synthase OS=Corynebacterium glutamicum GN=gltA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 72/245 (29.39%), Postives = 119/245 (48.57%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV--QSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFD------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 818 G++P+ +++ + E+R + + + P AHPM AS V L Q + E + K+ ++ L+A+VP++AAY + R K + D+SL+ NF M+ G+ DP M++ + + +H+DHE N S T ++ SA ++ ++S A +N L+GPLHG ANQ VL ++ + G + T K K G + GFGH V + DPR +E Sbjct: 101 GELPTPDELHKFNDEIRHHTLLDEDFKSQFNVFPRDAHPMATLASSVNILSTYYQDQLNPLDEAQLDKA---------TVRLMAKVPMLAAYAH-RARKGAPYMYPDNSLNARENFLRMMFGYPTEPYEIDPIMVKALDKLLILHADHEQ-NCSTSTVRMIGSAQANMFVSIAGGINALSGPLHGGANQAVLEMLEDIKSNHGGDATEFMNK---VKNKEDGVRLMGFGHRVYKNYDPRAAIVKE 331
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_BACCO (Citrate synthase OS=Bacillus coagulans GN=ctsA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 68/239 (28.45%), Postives = 113/239 (47.28%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKMLE--LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGV-LRKTDPRYTCQRE 818 G +P++ + L + L+ VPD + + + LP TAHPM +GV L + F H + + + L+ ++P + A Y ++ + + P D L Y NF +M+ P LE + + ++S+HE N S T ++AS LSD Y + A+ L G LHG AN+ V+ ++ + T E K + L+ + + GFGH V ++K DPR +E Sbjct: 57 GTIPNEAEKQHLEETLKQEYDVPDEIIQVLSLLPKTAHPMDALRTGVSVL---ASFDTELLNREHST-----NLKRAYQLLGKIPNIVANSYHILHSEEPVQPLQD-LSYSANFLYMITGKKPTELEEKIFDRSLVLYSEHELPN-STFTARVIASTLSDLYGALTGAVASLKGHLHGGANEAVMEMLQ-------DAQTVEGFKHLLHDKLSKKEKIMGFGHRVYMKKMDPRAAMMKE 278
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY3_ARATH (Citrate synthase 3, peroxisomal OS=Arabidopsis thaliana GN=CSY3 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18 Identity = 68/239 (28.45%), Postives = 114/239 (47.70%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKG--IHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G +PS+ Q+ + + VP V I ++P AHPM S + AL + +G I+ SK + + + +I + P +AA Y R+ ++P + L Y NF +ML +P++ ++ + +H++HE +A HL +S + D Y + A A+ L GPLHG AN+ VL ++ E G T E + +++ N + + GFGH V + DPR Sbjct: 140 GNLPSESQLSDWEFAVSQHSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALRGQDIYDSK--QVRDKQIIRIIGKAPTIAAAAYLRMAGRPPVLPSGN-LPYADNFLYMLDSLGNRSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGV-DVYTAVAGAVGALYGPLHGGANEAVL----KMLSEIG---TVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPR 367
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY2_ARATH (Citrate synthase 2, peroxisomal OS=Arabidopsis thaliana GN=CSY2 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.154e-18 Identity = 69/239 (28.87%), Postives = 113/239 (47.28%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKG--IHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G +PS+ Q+ + + VP V I ++P AHPM S + AL + G I+KSK + + + ++ + P +AA Y R ++P + L Y NF +ML +P++ ++ + +H++HE +A HL +S + D Y + A A+ L GPLHG AN+ VL ++ E G T E + D++ N + + GFGH V + DPR Sbjct: 145 GNLPSQSQLADWEFTVSQHSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALSGQDIYKSK--QVRDKQIVRILGKAPTIAAAAYLRTAGRPPVLPSAN-LSYSENFLYMLDSMGNRSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGV-DVYTACAGAVGALYGPLHGGANEAVL----KMLAEIG---TAENIPDFIEGVKNRKRKMSGFGHRVYKNYDPR 372
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY1_MYCTU (Citrate synthase 1 OS=Mycobacterium tuberculosis GN=gltA2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.255e-18 Identity = 71/245 (28.98%), Postives = 123/245 (50.20%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHM-LGFD------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLN--SGQVVPGFGHGVLRKTDPRYTCQRE 818 G++P +Q+ + ++ + + + + D P AHPM +S V AL +Q+A + + ++ L+A++P +AAY Y++ + P D+SL NF + GF DP+++ + + +H+DHE N S T LV S+ ++ + S + +N L GPLHG ANQ VL ++ + D G++V+ ++V K N +G + GFGH V + DPR +E Sbjct: 95 GELPDTDQLAQFTGRIQRHTMLHEDLKRFFDGFPRNAHPMPVLSSVVNALSAY--YQDALDPMDNGQ-----VELSTIRLLAKLPTIAAYAYKKSVGQPFLYP-DNSLTLVENFLRLTFGFPAEPYQADPEVVRALDMLFILHADHEQ-NCSTSTVRLVGSSRANLFTSISGGINALWGPLHGGANQAVLEMLEGIRDS-GDDVS-----EFVRKVKNREAGVKLMGFGHRVYKNYDPRARIVKE 324 The following BLAST results are available for this feature:
BLAST of FC873378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873378 ID=FC873378; Name=FC873378; organism=Citrus clementina; type=EST; length=819bpback to top |