FC873378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CYSZ_CUCMA (Citrate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.517e-17 Identity = 63/237 (26.58%), Postives = 109/237 (45.99%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G +PS+ Q+ + + VP + I A+P AHPM S + AL V +G K + + +I + P +AA Y R+ ++P +L Y NF +ML +P++ ++ + +H++HE ++ HL +S + D + + + A+ L GPLHG AN+ VL ++ E G T + +++ N + + GFGH V + DPR Sbjct: 150 GNLPSQSQLADWEFAISQHSAVPQGLVDIIQAMPHDAHPMGVLVSAMSALSVFHPDANPALRGQDLYKSKQVRDKQIARIIGKAPTIAAAAYLRLAGRPPVLP-SSNLSYSENFLYMLDSLGNRSYKPNPRLARVLDILFILHAEHEMNCSTSAARHLASSGV-DVFTALSGAVGALYGPLHGGANEAVL----KMLSEIG---TVNNIPEFIEGVKNRKRKMSGFGHRVYKNYDPR 377
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: PRPC_SALTY (2-methylcitrate synthase OS=Salmonella typhimurium GN=prpC PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17 Identity = 64/233 (27.47%), Postives = 112/233 (48.07%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKML--ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRY 803 GK+P++++++ +L+ +P V ++ALP +HPM +GV AL +E + + + L+A + + Y Y + +I P+ D GG+F H+L + P + M + + ++++HE N S T ++A SD Y + A+ L GP HG AN EV L I+ + T ++ + + K + + +VV GFGH V DPR+ Sbjct: 68 GKLPTRDELNAYKSKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTV--------SGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDVYSAIIGAIGALRGPKHGGAN-EVSLEIQQRYE------TPDEAEADIRKRVENKEVVIGFGHPVYTIADPRH 284
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_ACIAN (Citrate synthase OS=Acinetobacter calcoaceticus subsp. anitratus GN=gltA PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.999e-17 Identity = 70/238 (29.41%), Postives = 108/238 (45.38%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD--------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G++P+ EQ ++R V D V + + AHPM V AL E H+ ++ LIA++P +AA+ Y+ I P++D L+Y NF HM+ +P + M T+H+DHE N S T L S ++PY +A ++ L GP HG AN+ VL ++DE G + E + +++ K + GFGH V + DPR Sbjct: 95 GELPTAEQKVEFDAKVRAHTMVHDQVSRFFNGFRRDAHPMAIMVGVVGALSAFYHNNLDIEDINHREI-------TAIRLIAKIPTLAAWSYKYTVGQPFIYPRND-LNYAENFLHMMFATPADRDYKVNPVLARAMDRIFTLHADHEQ-NASTSTVRLAGSTGANPYACISAGISALWGPAHGGANEAVL----KMLDEIG---SVENVAEFMEKVKRKEVKLMGFGHRVYKNFDPR 316
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: PRPC_ECOLI (2-methylcitrate synthase OS=Escherichia coli (strain K12) GN=prpC PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16 Identity = 64/233 (27.47%), Postives = 111/233 (47.64%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKML--ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRY 803 GK+P+++++ +L+ +P V ++ALP +HPM +GV AL +E + + + L+A + + Y Y + +I P+ D GG+F H+L + P + M + + ++++HE N S T ++A SD Y + A+ L GP HG AN EV L I+ + T ++ + + K + + +VV GFGH V DPR+ Sbjct: 68 GKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTV--------SGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGAN-EVSLEIQQRYE------TPDEAEADIRKRVENKEVVIGFGHPVYTIADPRH 284
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_DEIRA (Citrate synthase OS=Deinococcus radiodurans GN=gltA PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16 Identity = 65/237 (27.43%), Postives = 111/237 (46.84%), Query Frame = 3 Query: 114 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDP--KMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 818 K+P+ E++ EL+ +PD + I +P HPM + V L + E ++ S +IA+ + A + + + P+ D L + GNF +ML ++P + L + + +H+DH G N S T +S LSD Y +A+ L GPLHG AN+ V+ +++DE G T ++ + Y+ L++ + + G GH V + DPR R+ Sbjct: 55 KLPTAEELAKFDAELKANRAIPDQLVGIIRDMPKGVHPMQALRTAVSYLGLLDPQAEDITPEARRAI--------STRMIAQFSTIIAAINRAQEGQDIVAPRAD-LTHAGNFLYMLTGNEPTPEQARLFDIALVLHADH-GMNASTFTAIATSSTLSDMYSCMVSAIGALKGPLHGGANEAVM----TMLDEIG---TVDKAEAYITGKLDNKEKIMGVGHRVYKYFDPRSRVLRD 274
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_ACEAC (Citrate synthase OS=Acetobacter aceti GN=aarA PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16 Identity = 72/259 (27.80%), Postives = 114/259 (44.02%), Query Frame = 3 Query: 51 PAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYED--SLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 P A+ D G++P+K Q D + L + + + + + AHPM V AL + + +A + I P D ++ LIA++P +AA+ Y+ + I P++D L+Y NF M+ +P + M + +H+DHE N S T L S ++P+ AA + L GP HG AN+ VL + + + Q+KD NSG + GFGH V + DPR Sbjct: 80 PIAQLDENASYEEVIYLLLNGELPNKVQYDTFTNTLTNHTLLHEQIRNFFNGFRRDAHPMAILCGTVGALS--AFYPDANDIAI-------PANRDLAAMRLIAKIPTIAAWAYKYTQGEAFIYPRND-LNYAENFLSMMFARMSEPYKVNPVLARAMNRILILHADHEQ-NASTSTVRLAGSTGANPFACIAAGIAALWGPAHGGANEAVLKMLARIGKKENIPAFIAQVKD-----KNSGVKLMGFGHRVYKNFDPR 322
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY2_BACSU (Citrate synthase 2 OS=Bacillus subtilis GN=citZ PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 66/234 (28.21%), Postives = 110/234 (47.01%), Query Frame = 3 Query: 114 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPV-TAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYG--GNFSHMLGFDDPKMLEL--MRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 ++P+K++++ L ++L A VP + + + + HPM + + L + + E Y ++ L A+VP + A + RI K + P + DYG NF + L ++P +E+ + +H+DHE N S T + + LSD Y AA+ L GPLHG AN+ V+ ++ E GE E + Y+ L + + GFGH V + DPR Sbjct: 52 RLPNKKELEELKQQLAKEAAVPQEIIEHFKSYSLENVHPMAALRTAISLLGLLDSEADTMNP--------EANYRKAIRLQAKVPGLVA-AFSRIRKG--LEPVEPREDYGIAENFLYTLNGEEPSPIEVEAFNKALILHADHEL-NASTFTARVCVATLSDIYSGITAAIGALKGPLHGGANEGVM----KMLTEIGE---VENAEPYIRAKLEKKEKIMGFGHRVYKHGDPR 266
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_STRMU (Citrate synthase OS=Streptococcus mutans GN=citZ PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16 Identity = 65/201 (32.34%), Postives = 100/201 (49.75%), Query Frame = 3 Query: 222 HPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKMLELMRLY--VTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 818 HPM+ S V L V + +A E+ + E TY+ S+ L+A++P + A + I P+ D L + NF +ML P LE++ + + +H++HE N S + AS LSD Y A+ L GPLHG AN+ V ++ + E G+ + Y+ + LNS + + GFGH V + DPR RE Sbjct: 90 HPMSVLRSTVSLLGVYN--LKAEERSV------EATYDQSIQLMAKIPTIIATFARLRQGLSPIAPRKD-LGFAANFLYMLNGRLPSELEILAMNRALVLHAEHEL-NASTFAARVCASTLSDIYSCVTTAIGTLKGPLHGGANERVFDMLRE-IREYGD------VDSYLQEKLNSKEKIMGFGHRVYQTQDPREKYLRE 273
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_HELPJ (Citrate synthase OS=Helicobacter pylori J99 GN=gltA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16 Identity = 76/249 (30.52%), Postives = 115/249 (46.18%), Query Frame = 3 Query: 108 TGKVPSKEQVDGLS--KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYED-SLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFD--------------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 TG++P K Q + L ELR R+ V + + A P AHPM + +SGV L H++ + E Y+ + ++A++P +AA Y R II D + Y N ML G+ P +E +T+H+DH G N S+ T VAS PY + +A ++ L G LHG AN++VLL ++ + D + ++KD N + GFGH V + DPR Sbjct: 91 TGELP-KNQDESLEFELELRHRSFVHESLLNMFSAFPSNAHPMAKLSSGVSILSTLYS--------THQNMHTEEDYQTMARRIVAKIPTLAAICY-RNEVGAPIIYPDIARSYVENILFMLRGYPYSRLKHTTQGEVGITPLEVEAFDKILTLHADH-GQNASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGDVKNVDKYIARVKD-----KNDNFKLMGFGHRVYKSYDPR 323
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_PYRFU (Citrate synthase OS=Pyrococcus furiosus GN=gltA PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15 Identity = 63/232 (27.16%), Postives = 112/232 (48.28%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFDDPKMLE-LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 GK+PS +++ KEL +P V + ++ALP HPM + + L ++ + + E Y +++ A++P + A Y RI + +P + L + NF +ML G + PK E M + + ++++HE N S V S LSD Y + A + L GP+HG A ++ + + E + E+++++ +K L + + G GH V + DPR Sbjct: 57 GKLPSLSELENFKKELAKSRGLPKEVIEIMEALPKNTHPMGALRTIISYL---GNIDDSGDIPVTP----EEVYRIGISVTAKIPTIVANWY-RIKNGLEYVPPKEKLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHE-INASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGA-------VEEAIKQFMEIGSPEKVEEWFFKALQQKRKIMGAGHRVYKTYDPR 272 The following BLAST results are available for this feature:
BLAST of FC873378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873378 ID=FC873378; Name=FC873378; organism=Citrus clementina; type=EST; length=819bpback to top |