FC873378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY3_BACSU (2-methylcitrate synthase OS=Bacillus subtilis GN=mmgD PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.520e-15 Identity = 64/239 (26.78%), Postives = 113/239 (47.28%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKMLE--LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGV-LRKTDPRYTCQRE 818 G++P + +++ L +++ +++P + ++ LP HPM +G+ AL Y++ I + E + L+ ++P + A Y+ I K I+P +L Y NF +M+ P LE + + ++S+HE N S ++AS SD Y + A+ L G LHG AN+ V+ + E TT + + L + + GFGH V ++K DPR +E Sbjct: 57 GRLPEESEMETLERKINSASSLPADHLRLLELLPEDTHPMDGLRTGLSALA-------GYDRQID-DRSPSANKERAYQLLGKMPALTAASYRIINKKEPILPLQ-TLSYSANFLYMMTGKLPSSLEEQIFDRSLVLYSEHEMPN-STFAARVIASTHSDLYGALTGAVASLKGNLHGGANEAVMYLLL-------EAKTTSDFEQLLQTKLKRKEKIMGFGHRVYMKKMDPRALMMKE 278
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_THIFE (Citrate synthase OS=Thiobacillus ferrooxidans GN=gltA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 67/237 (28.27%), Postives = 113/237 (47.68%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV---QSEFQEAYEKG--IHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G +P ++ LR V V + + +PVT HPM V +L + Q E +A E+G +H ++ +IAR+P + A Q + + I P+ D L + NF +ML DP +++ + +H++H N S + + S L++PY A+ LAGPLHG ANQ+ VV+ E + +Q+ Y+ + + + + + GFGH + + DPR Sbjct: 56 GVLPGAADLERFDHGLRAHRQVKYNVREIMKFMPVTGHPMDMLHCAVASLGMFYPQQELSDA-ERGNTLHLDAM-------AMRIIARMPTIVAMWEQMRFGNDPISPRPD-LSHAANFLYMLSGREPDPAHTKILDSCLILHAEHTI-NASTFSVLVTGSTLTNPYHVIGGAIGTLAGPLHGGANQK-------VVEMLEEISSVQQVGAYLDRKMANKEKIWGFGHRIYKTRDPR 275
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_HELPY (Citrate synthase OS=Helicobacter pylori GN=gltA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 75/249 (30.12%), Postives = 114/249 (45.78%), Query Frame = 3 Query: 108 TGKVPSKEQVDGLS--KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYED-SLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFD--------------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 TG++P K Q + L ELR R+ V + + A P AHPM + +SGV L H++ + E Y+ + ++A++P +AA Y R II D + Y N ML G+ P +E +T+H+DH N S+ T VAS PY + +A ++ L G LHG AN++VLL ++ + D + ++KD N + GFGH V + DPR Sbjct: 91 TGELP-KNQDESLEFELELRHRSFVHESLLNMFSAFPSNAHPMAKLSSGVSILSTLYS--------THQNMHTEEDYQTMARRIVAKIPTLAAICY-RNEVGAPIIYPDIARSYVENILFMLRGYPYSRLKHTTQGEVEITPLEVEAFDKILTLHADHSQ-NASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGDVKNVDKYIARVKD-----KNDNFKLMGFGHRVYKSYDPR 323
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISYC_DICDI (Citrate synthase OS=Dictyostelium discoideum GN=gltA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.333e-15 Identity = 64/241 (26.56%), Postives = 106/241 (43.98%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQ----RIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G +PSKEQ + + ++ + + + + + + AHPM S + A+ G+ K + + ++ ++P +AA Y+ R Y D ++L Y NF +ML P + + IH+DHE N S T +AS L DPY + A + L GPLHG AN+ VL ++++ T E + ++ + Q + GFGH V + DPR Sbjct: 109 GDLPSKEQSNLWNTKIMNHTFIHENLISMMKSFRYDAHPMGMLISSLSAMSTFYPEANPALAGVDIYKNKQLMNKQIFRILGKLPTIAACAYRHRIGRPYND-----PSNTLSYTENFLYMLDRLSESNYKPHPVLTRALDKLFIIHADHEL-NCSTATMRQIASTLVDPYTACAGSAGALYGPLHGGANEAVLRMLEAI-------GTIENIPKFIEQVKQKKQRLMGFGHRVYKSYDPR 336
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICJA (Citrate synthase (Fragment) OS=Rickettsia japonica GN=gltA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 65/246 (26.42%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V D ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 92 GELPSGEQYNNFTKQVAHHSLVNDRLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPYTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSEYIPKYIAKAKDKNDPFRLMGFGHRVYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICCN (Citrate synthase OS=Rickettsia conorii GN=gltA PE=3 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 65/246 (26.42%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ IK + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 99 GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMIKEI-------GSSEYIPKYIAKAKDKNDPFRLMGFGHRVYKNYDPRAAVLKE 326
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICSL (Citrate synthase (Fragment) OS=Rickettsia slovaca GN=gltA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 64/246 (26.02%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 92 GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSEYIPKYIAKAKDKNDPFRLMGFGHRVYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICSI (Citrate synthase (Fragment) OS=Rickettsia sibirica GN=gltA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 64/246 (26.02%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 92 GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSEYIPKYIAKAKDKNDPFRLMGFGHRVYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICPA (Citrate synthase (Fragment) OS=Rickettsia parkeri GN=gltA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 64/246 (26.02%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 92 GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSEYIPKYIAKAKDKNDPFRLMGFGHRVYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICAE (Citrate synthase OS=Rickettsia africae (strain ESF-5) GN=gltA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 64/246 (26.02%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 99 GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSEYIPKYIAKAKDKNDPFRLMGFGHRVYKNYDPRAAVLKE 326 The following BLAST results are available for this feature:
BLAST of FC873378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873378 ID=FC873378; Name=FC873378; organism=Citrus clementina; type=EST; length=819bpback to top |