FC873378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICHE (Citrate synthase (Fragment) OS=Rickettsia helvetica GN=gltA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 63/246 (25.61%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E Y+ ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 92 GELPSSEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNCK--EADYKLTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYKVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSENIPKYIAKAKDKNDPFRLIGFGHRVYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICFE (Citrate synthase OS=Rickettsia felis GN=gltA PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 64/246 (26.02%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 99 GELPSIEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYKVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACVSTGIASLWGPAHGGANEAVINMLKEI-------GSSENIPKYIAKAKDKNDPFRLMGFGHRVYKNYDPRAAVLKE 326
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICRH (Citrate synthase (Fragment) OS=Rickettsia rhipicephali GN=gltA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14 Identity = 63/246 (25.61%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH + + DPR +E Sbjct: 92 GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYKVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEVVINMLKEI-------GSSEYIPKYIAKAKDKNDPFRLMGFGHRIYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICMA (Citrate synthase (Fragment) OS=Rickettsia massiliae GN=gltA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14 Identity = 63/246 (25.61%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH + + DPR +E Sbjct: 92 GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYKVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEVVINMLKEI-------GSSEYIPKYIAKAKDKNDPFRLMGFGHRIYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICCA (Citrate synthase (Fragment) OS=Rickettsia canadensis GN=gltA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14 Identity = 64/246 (26.02%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 92 GELPSSEQYNNFTKKVAVHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTMAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCMKYEVNPVIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSENIPKYIAKAKDKDDPFRLMGFGHRVYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_PSEAE (Citrate synthase OS=Pseudomonas aeruginosa GN=gltA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14 Identity = 65/238 (27.31%), Postives = 112/238 (47.06%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD--------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G++P+ Q + +++ V + + + AHPM + AL + + ++ + I+ K+ E + LIA++P +AA VY+ + + P++D L+Y NF HM+ F+ P + + M +H+DHE N S T L S+ ++P+ A+ + L GP HG AN+ VL + + D + E+ KD N + GFGH V + DPR Sbjct: 93 GELPTAAQKEQFVGTIKNHTMVHEQLKTFFNGFRRDAHPMAVMCGVIGALS--AFYHDSLD--INNPKHREVSAH---RLIAKMPTIAAMVYKYSKGEPMMYPRND-LNYAENFLHMM-FNTPCETKPISPVLAKAMDRIFILHADHEQ-NASTSTVRLAGSSGANPFACIASGIAALWGPAHGGANEAVLRMLDEIGDVSNIDKFVEKAKD-----KNDPFKLMGFGHRVYKNFDPR 315
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_COXBU (Citrate synthase OS=Coxiella burnetii GN=gltA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14 Identity = 63/237 (26.58%), Postives = 108/237 (45.57%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-------GFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G++P+K + + + +++ +V + V K + AHPM S + AL Y + +K + ++ LIA++P +AA Y+ + P+ +++Y NF HML DP + M +H+DHE N S T + S ++P+ +A ++ L GP HG AN+ L ++ + DE ++ KD N + GFGH V + DPR Sbjct: 92 GELPNKGEKEKFVRTIKEHTSVYEQVTKFFNGFHYDAHPMAMVLSTIGALSA------FYHDALDITKPADRELS-AIRLIAKMPTLAAMSYKYSIGQPFMHPRR-AMNYAENFLHMLFGTPYEETEPDPVLARAMDRIFILHADHEQ-NASTTTVRVAGSTGANPFACISAGISALWGPAHGGANEACLNMLRKIGDEKNIGQYIKKAKD-----KNDPFRLMGFGHRVYKNYDPR 314
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICTY (Citrate synthase OS=Rickettsia typhi GN=gltA PE=3 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 64/246 (26.02%), Postives = 112/246 (45.53%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + ++ A V + ++ ++HPM + V +L A+ + + E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + YV K + + GFGH V + DPR +E Sbjct: 99 GELPSSEQYHNFTTKIAHHALVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDL--LNFNETDYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYKVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSENIPKYVAKAKDKNDPFRLMGFGHRVYKSYDPRAAVLKE 326
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_ASTRI (Citrate synthase (Fragment) OS=Astrakhan rickettsia GN=gltA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13 Identity = 63/246 (25.61%), Postives = 113/246 (45.93%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+ LD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR +E Sbjct: 92 GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNPLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSEYIPKYIAKAKDKNDPFRLMGFGHRVYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICBR (Citrate synthase OS=Rickettsia bellii (strain RML369-C) GN=gltA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 63/246 (25.61%), Postives = 113/246 (45.93%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKT--LNSGQVVPGFGHGVLRKTDPRYTCQRE 818 G++P+ +Q + +K++ A V + ++ ++HPM + V +L Y ++ K E YE ++ +IA++P +AA Y+ + P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + + E + Y+ K N + GFGH V + DPR +E Sbjct: 98 GELPNNKQYNDFTKKVAHHALVNERLHYLFQTFCSSSHPMAIMLAAVGSLSA------FYPDLLNFFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFVYP-DNSLDFTENFLHMMFATPCEKYKVNPVIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACVSTGIASLWGPAHGGANEAVINMLKEI-------GSVENIPKYIAKAKDKNDNFRLMGFGHRVYKNYDPRAAVLKE 326 The following BLAST results are available for this feature:
BLAST of FC873378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873378 ID=FC873378; Name=FC873378; organism=Citrus clementina; type=EST; length=819bpback to top |