FC873378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICBE (Citrate synthase (Fragment) OS=Rickettsia bellii GN=gltA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 63/246 (25.61%), Postives = 113/246 (45.93%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKT--LNSGQVVPGFGHGVLRKTDPRYTCQRE 818 G++P+ +Q + +K++ A V + ++ ++HPM + V +L Y ++ K E YE ++ +IA++P +AA Y+ + P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + + E + Y+ K N + GFGH V + DPR +E Sbjct: 92 GELPNNKQYNDFTKKVAHHALVNERLHYLFQTFCSSSHPMAIMLAAVGSLSA------FYPDLLNFFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFVYP-DNSLDFTENFLHMMFATPCEKYKVNPVIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACVSTGIASLWGPAHGGANEAVINMLKEI-------GSVENIPKYIAKAKDKNDNFRLMGFGHRVYKNYDPRAAVLKE 320
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_ABDS2 (Citrate synthase OS=Antarctic bacterium DS2-3R GN=gltA PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 60/233 (25.75%), Postives = 103/233 (44.21%), Query Frame = 3 Query: 114 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDD--PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVW--KTLNSGQVVPGFGHGVLRKTDPR 800 ++P+ ++ R + + V AID L HPM + V L + E E +++L+A P V AY +R + I P++D LDY NF M ++ P+++E + + ++++H N S T ++ S L+D + + A+ L GPLHG AN+ V+ + + E++ + W L + V GFGH V + D R Sbjct: 57 ELPNDSELKAFVNFERSHRKLDENVKGAIDLLSTACHPMDVARTAVSVLGANHARAQDSSP--------EANLEKAMSLLATFPSVVAYDQRRRRGEELIEPRED-LDYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHSF-NASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGIRKDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSR 279
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICPR (Citrate synthase OS=Rickettsia prowazekii GN=gltA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13 Identity = 63/246 (25.61%), Postives = 113/246 (45.93%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS +Q +K++ + V + ++ ++HPM + V +L A+ + + E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++P+ + + L GP HG AN+ V+ +K + ++E + YV K + + GFGH V + DPR +E Sbjct: 99 GELPSSDQYCNFTKKVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDL--LNFNETDYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYKVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSENIPKYVAKAKDKNDPFRLMGFGHRVYKSYDPRAAVLKE 326
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICAK (Citrate synthase (Fragment) OS=Rickettsia akari GN=gltA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13 Identity = 61/246 (24.80%), Postives = 114/246 (46.34%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPRYTCQRE 818 G++PS EQ + +K++ + V + ++ ++HPM + + +L A+ + K E YE ++ +IA++P +AA Y+ + P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++ + + + L GP HG AN+ V+ +K + ++E + Y+ K + + GFGH V + DPR + +E Sbjct: 92 GELPSIEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAIGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFVYP-DNSLDFTENFLHMMFATPCTKYKVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANAFACISTGIASLWGPAHGGANEAVINMLKEI-------GSSENIPKYIAKAKDKSDPFRLMGFGHRVYKNYDPRASVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_BACSU (Citrate synthase 1 OS=Bacillus subtilis GN=citA PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.864e-13 Identity = 65/240 (27.08%), Postives = 108/240 (45.00%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGG--NFSHMLGFDDPKMLELMRL--YVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 818 GK+PS E++ +L +P+++ + I +LP M+ + V AL + + P E+++ LIA P + AY + + I P S YG N+ +ML + P + L Y+ + ++H G N S + + S SD + AAL + GPLHG A V ++++ GE E + Y+ + L G+ + GFGH V + DPR R+ Sbjct: 52 GKLPSTEELQVFKDKLAAERNLPEHIERLIQSLPNNMDDMSVLRTVVSALG-------------ENTYTFHPKTEEAIRLIAITPSIIAYRKRWTRGEQAIAP---SSQYGHVENYYYMLTGEQPSEAKKKALETYMILATEH-GMNASTFSARVTLSTESDLVSAVTAALGTMKGPLHGGAPSAV----TKMLEDIGEK---EHAEAYLKEKLEKGERLMGFGHRVYKTKDPRAEALRQ 267
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RHIME (Citrate synthase OS=Rhizobium meliloti GN=gltA PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.171e-12 Identity = 64/243 (26.34%), Postives = 106/243 (43.62%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV----QSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLG-------FDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQV--VPGFGHGVLRKTDPR 800 G++P+K Q + V + + + AHPM V AL ++ + +++ + SL +IA++P +AA Y+ + PK+D LDY NF M +P + M +H+DHE N S T L S+ ++P+ AA + L GP HG AN+ L +++ E G T +++ +Y+ K + + GFGH V + DPR Sbjct: 93 GELPTKAQKADFDYRVTHHTMVHEQMSRFFTGFRRDAHPMAVMCGCVGALSAFYHDSTDITDPHQRMVA-----------SLRMIAKMPTIAAMAYKYHIGQPFVYPKND-LDYASNFLRMCFAVPCEEYVVNPVLARAMDRIFILHADHEQ-NASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANEAAL----NMLAEIG---TVDRIPEYITKAKDKNDPFRLMGFGHRVYKNYDPR 315
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY1_ARATH (Citrate synthase 1, peroxisomal OS=Arabidopsis thaliana GN=CSY1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12 Identity = 56/240 (23.33%), Postives = 108/240 (45.00%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV--QSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKI-IPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G +PS+ Q+ + + VP V I ++P HP+ + + AL + G++KSK + + + ++ + P +AA Y R K GK + +L Y NF +M+ +P++ ++ + + ++HE +A HL +S D Y + + + + GPLHG A +++ ++ E T E + +++ N + + GFGH + + DPR Sbjct: 142 GNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSK--QVRDKQIVRVLGQAPTIAAAAYLR--KAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSG-GDVYTAVSGGVGAIYGPLHGGA-------VEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPR 369
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_RICAU (Citrate synthase (Fragment) OS=Rickettsia australis GN=gltA PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.608e-12 Identity = 64/244 (26.23%), Postives = 111/244 (45.49%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 818 G++P+ EQ + + ++ + V + ++ A ++HPM + V +L A+ + K E YE ++ +IA++P +AA Y+ I P D+SLD+ NF HM+ +P + + +H+DHE N S T + S+ ++ + + + L GP HG AN+ V+ +K + EN+ K K N + GFGH V + DPR +E Sbjct: 92 GELPTIEQYNNFTTQVAHHSLVNERLHYLFQAFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYKVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANAFACISTGIASLWGPAHGGANEAVINMLKEI--GSSENIPKFIAKA---KDKNDPFRLMGFGHRVYKNYDPRAAVLKE 319
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_ECOLI (Citrate synthase OS=Escherichia coli (strain K12) GN=gltA PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 60/245 (24.49%), Postives = 111/245 (45.31%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 818 G+ P++EQ D + + + + + A +HPM AL + + ++ + ++ ++ E + L++++P +AA Y+ + P++D L Y GNF +M+ +P + M + +H+DHE N S T S+ ++P+ AA + L GP HG AN+ L ++ + + + + ++V K N + GFGH V + DPR T RE Sbjct: 93 GEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALA--AFYHDSLD--VNNPRHREIA---AFRLLSKMPTMAAMCYKYSIGQPFVYPRND-LSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQ-NASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEI-------SSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRE 321
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_ECOL6 (Citrate synthase OS=Escherichia coli O6 GN=gltA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 60/245 (24.49%), Postives = 111/245 (45.31%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 818 G+ P++EQ D + + + + + A +HPM AL + + ++ + ++ ++ E + L++++P +AA Y+ + P++D L Y GNF +M+ +P + M + +H+DHE N S T S+ ++P+ AA + L GP HG AN+ L ++ + + + + ++V K N + GFGH V + DPR T RE Sbjct: 93 GEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALA--AFYHDSLD--VNNPRHREIA---AFRLLSKMPTMAAMCYKYSIGQPFVYPRND-LSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQ-NASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEI-------SSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRE 321 The following BLAST results are available for this feature:
BLAST of FC873378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873378 ID=FC873378; Name=FC873378; organism=Citrus clementina; type=EST; length=819bpback to top |