FC873378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_SULSO (Citrate synthase OS=Sulfolobus solfataricus GN=gltA PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12 Identity = 68/233 (29.18%), Postives = 104/233 (44.64%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYW-EPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKMLEL--MRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 GK+P+K++++ L +L + VP V I +P A + G AL I K+ W E E ++++IA++ + A VY+R + IP + S + +F +P E+ M + +++DHE S + AS LSD Y S AAL L GPLHG A +E K ++ N D K +N + GFGH V + DPR Sbjct: 54 GKLPTKKELNDLKAKLNEEYEVPQEVLDTIYLMPKEADAIGLLEVGTAALA-----------SIDKNFKWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIP-EPSDSFAKSFLLASFAREPTTDEINAMDKALILYTDHEVP-ASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEA---FKQFIEIGDPNRVQNWFND---KVVNQKNRLMGFGHRVYKTYDPR 267
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_SALTY (Citrate synthase OS=Salmonella typhimurium GN=gltA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11 Identity = 59/245 (24.08%), Postives = 111/245 (45.31%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPRYTCQRE 818 G+ P++E+ D + + + + + A +HPM AL + + ++ + ++ ++ E + L++++P +AA Y+ + P++D L Y GNF +M+ +P + M + +H+DHE N S T S+ ++P+ AA + L GP HG AN+ L ++ + + + + ++V K N + GFGH V + DPR T RE Sbjct: 93 GEKPTQEEYDEFRTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALA--AFYHDSLD--VNNPRHREIA---AFRLLSKMPTMAAMCYKYSIGQPFVYPRND-LSYAGNFLNMMFSTPCETYEVNPVLERAMDRILILHADHEQ-NASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEI-------SSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRE 321
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_BARQU (Citrate synthase OS=Bartonella quintana GN=gltA PE=3 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.691e-11 Identity = 66/240 (27.50%), Postives = 107/240 (44.58%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD--------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPR 800 G++P+K++ + + V + + +HPM A V L S F Y I K + ++ LI++VP +AA Y+ + P++D L Y NF HM F +P + M T+H+DHE N S T LV S+ ++P+ AA + L GP HG AN+ L ++ + + E++ +++ K N + GFGH V + DPR Sbjct: 93 GELPTKQEKIDFDRCIMQHMMVHEQFTRFFHGFRRDSHPM---AVMVACLGAMSAF---YHDSID-IKDAQQRMIAAIRLISKVPTLAAMAYKYSIGQAFVYPRND-LSYAANFLHMC-FSVPCEEYKINPVLSRAMDRIFTLHADHEQ-NASTSTVRLVGSSGANPFACIAAGVACLWGPAHGGANEACLKMLQKI-------GSVERIPEFIARAKDKNDPFRLMGFGHRVYKNYDPR 315
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISYP_DICDI (Citrate synthase, peroxisomal OS=Dictyostelium discoideum GN=cshA PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.691e-11 Identity = 62/239 (25.94%), Postives = 104/239 (43.51%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV-QSEFQEAYEKG-IHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGQVVPGFGHGVLRKTDPR 800 G +P+K Q+DG S ++ + + + + AHPM S V AL E A G I KS+ + ++ ++P +AA ++ P + L Y NF +ML +P + + + +H+DHE +A H+ +S +DPY S A A L GP HG AN+ VL + + + E + ++ + + + GFGH + + DPR Sbjct: 128 GNLPNKSQLDGWSNKIMTHTFLHENLVGLMKTFRYDAHPMGMLISTVAALGTFYPEANPALAGGDIFKSE--NVRNKQIYRIVGKLPTIAACAWRHRIGRPYNTPVNH-LGYTENFLYMLDKLSEPDYKPNPVLCRALEILFILHADHELNCSTAAMRHISSSG-TDPYTSVAGAAGALYGPSHGGANEAVLDMLIHIGSK-------ENIPQFISDVKSKKKKLMGFGHRIYKNYDPR 355
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY2_RHITR (Citrate synthase, plasmid OS=Rhizobium tropici GN=pcsA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.691e-11 Identity = 64/243 (26.34%), Postives = 105/243 (43.21%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV----QSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLG-------FDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPR 800 G++P+ Q + V + + + AHPM V AL ++ + +++ + SL +IA++P +AA Y+ + PK+D LDY NF M +P + M +H+DHE N S T L S+ ++P+ AA + L GP HG AN+ L +++ E G T +++ +Y+ K N + GFGH V + DPR Sbjct: 93 GELPTAAQKKDFDYRVVHHTMVHEQMSRFFTGFRRDAHPMAVMCGCVGALSAFYHDSTDITDPHQRMVA-----------SLRMIAKMPTLAAMAYKYHIGQPFVYPKND-LDYASNFLRMCFAVPCEEYVVNPVLARAMDRIFILHADHEQ-NASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANERAL----NMLTEIG---TVDRIPEYIARAKDKNDPFRLMGFGHRVYKNYDPR 315
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY1_RHITR (Citrate synthase, chromosomal OS=Rhizobium tropici GN=ccsA PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11 Identity = 64/243 (26.34%), Postives = 105/243 (43.21%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV----QSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLG-------FDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPR 800 G++P+ Q + V + + + AHPM V AL ++ + +++ + SL +IA++P +AA Y+ + PK+D LDY NF M +P + M +H+DHE N S T L S+ ++P+ AA + L GP HG AN+ L +++ E G T +++ +Y+ K N + GFGH V + DPR Sbjct: 93 GELPTAAQKKDFDYRVVHHTMVHEQMSRFFTGFRRDAHPMAVMCGCVGALSAFYHDSTDITDPHQRMVA-----------SLRMIAKMPTLAAMAYKYHIGQPFVYPKND-LDYASNFLRMCFAVPCEEYVVNPVLARAMDRIFILHADHEQ-NASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANEAAL----NMLTEIG---TVDRIPEYIARAKDKNDPFRLMGFGHRVYKNYDPR 315
BLAST of FC873378 vs. ExPASy Swiss-Prot
Match: CISY_BARBA (Citrate synthase (Fragment) OS=Bartonella bacilliformis GN=gltA PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.884e-11 Identity = 68/240 (28.33%), Postives = 108/240 (45.00%), Query Frame = 3 Query: 111 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD--------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYV--WKTLNSGQVVPGFGHGVLRKTDPR 800 G++P+K+Q + + V + + +HPM A V L S F Y I+ + + S+ LI++VP +AA Y+ + P++D L+Y NF HM F P + M T+H+DHE N S T L S+ ++PY AA + L GP HG AN+ L ++ E G + +++ +++ K N + GFGH V + DPR Sbjct: 35 GELPNKQQKIDFDRCIMRHTMVHEQFARFFHGFRRDSHPM---AVMVACLGAMSAF---YHDSINITDPQQRMIA-SIRLISKVPTLAAMAYKYSIGQPFVYPRND-LNYATNFLHMC-FSVPCEEHKISPVIARAMDRIFTLHADHEQ-NASTSTVRLAGSSGANPYACIAAGVACLWGPAHGGANEACL----KMLQEIG---SVKKIPEFIARAKDKNDPFRLMGFGHRVYKNYDPR 257 The following BLAST results are available for this feature:
BLAST of FC873378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873378 ID=FC873378; Name=FC873378; organism=Citrus clementina; type=EST; length=819bpback to top |