FC873385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 3.352e-39 Identity = 80/170 (47.06%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 650 + KLL+IG+S VGK+ L R K++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN ILVGNK DM E +R + T +GQ L ++ G +FFETSAK N+NV++ F + I +++++ Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDM-EDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES 198
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.352e-39 Identity = 83/183 (45.36%), Postives = 122/183 (66.67%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIRIN 686 L K+++IGDSG GKS LLLR KI+T+++D IKLQIWDTAGQERFRTIT+ YYRGA GI+ VYDVT++ SF++I W+++I+++A+ NV K+L+GNK D+ ES R V + + +A++ + + E SAKT+ NVE+ F +IA+ +K ++ S A T+ +N Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAES-RVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPSNAPASTVSLN 188
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.718e-39 Identity = 80/170 (47.06%), Postives = 113/170 (66.47%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 650 + KLL+IG+S VGK+ L R K++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN IL GNK DM E +R V T +GQ L ++ G +FFETSAK N+NV++ F + I +++++ Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDM-EDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES 198
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.718e-39 Identity = 80/170 (47.06%), Postives = 113/170 (66.47%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 650 + KLL+IG+S VGK+ L R K++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN IL GNK DM E +R V T +GQ L ++ G +FFETSAK N+NV++ F + I +++++ Sbjct: 30 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDM-EDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES 198
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 9.754e-39 Identity = 87/186 (46.77%), Postives = 116/186 (62.37%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL--ADTDSRAEPQTIRINQP 692 L K ++IGD+GVGKSCLLL+ R I +D K IKLQIWDTAGQE FR+IT +YYRG+ G LLVYD+T +FN++ W+++ +A+ N+ IL+GNK+DM ESKRAV +G+ ADE G+ F ETSAKT NVEE F + A I +++ D D E I++ P Sbjct: 5 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDM-ESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNESFGIKLGAP 189
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.706e-38 Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVF 608 + KLLLIG+S VGK+ L R K++T+ KRIKLQIWDTAGQER+RTITTAYYRGAMG LL+YD+ ++ SF +++W I+ ++ DN ILVGNK D+ E +R VP G+ LAD+ G +FFE SAK N+NV++VF Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDL-EDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVF 176
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.706e-38 Identity = 81/176 (46.02%), Postives = 121/176 (68.75%), Query Frame = 3 Query: 147 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 671 K++L+GDSGVGK+CLL+R + + +++DG ++KLQIWDTAGQERFR++T AYYR A +LL+YDVT+++SF++I+ W+ I++HA D+V +L+GNK D +RAV + LA +YG+ F ETSAKT LNV+ F +IA+++KQR T + +EP+ Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVD-SAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKELKQR--HTKAPSEPR 237
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.841e-38 Identity = 80/170 (47.06%), Postives = 111/170 (65.29%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 650 + KLLLIG+S VGK+ L R K++T+ KRIKLQIWDTAGQER+RTITTAYYRGAMG LL+YD+ ++ SF +++W I+ ++ DN ILVGNK D+ E +R VP G+ LAD+ G +FFE SAK N+NV++VF + I +++ ++ Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDL-EDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNES 190
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 4.841e-38 Identity = 78/165 (47.27%), Postives = 114/165 (69.09%), Query Frame = 3 Query: 147 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 638 K++L+GDSGVGK+C L++ + + + +DG R+KLQIWDTAGQERFR++T AYYR A +LL+YD+T++SSF+NIR W+ I ++A +V +L+GNKAD+ S+R + + G+ LA EYG+ F ETSAKT +NVE F +IA+++K R Sbjct: 31 KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADV-SSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYR 194
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.841e-38 Identity = 81/183 (44.26%), Postives = 122/183 (66.67%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIRIN 686 L K+++IGDSG GKS LLLR KI+T+++D IKLQIWDTAGQERFRTIT+ YYRGA GI+ VYDVT++ SF++I W+++I+++A+ NV K+L+GNK D+ +S R V + + +A++ + + E SAKT+ NVE+ F +IA+ +K ++ S A T+ ++ Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDS-RVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPSNAPTSTVNLS 188 The following BLAST results are available for this feature:
BLAST of FC873385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873385 ID=FC873385; Name=FC873385; organism=Citrus clementina; type=EST; length=832bpback to top |