FC873385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.728e-36 Identity = 77/163 (47.24%), Postives = 105/163 (64.42%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 629 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA +N+ +LVGNK+D+ RAVPT + +A A++ + F ETSA + NVEE F +I +I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 7.728e-36 Identity = 80/185 (43.24%), Postives = 111/185 (60.00%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD-TDSRAEPQTIRINQP 692 L K + +GDSGVGKS +LLR KI+T+ ++GK IKLQIWDTAGQERFR + YRG +++VYDVTD+ SF N+ WI+ IE++A DNV K+++GNK+DM S++ V Q AD I F ETSAK +N+E+ F S+ + R+ + S TI + +P Sbjct: 8 LFKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDM-ISQKVVDPFLAQEFADSLDITFKETSAKQAINIEDAFISLVKLCIDRIEEFKPSSTSSSTIILKKP 191
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.728e-36 Identity = 77/182 (42.31%), Postives = 112/182 (61.54%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIRIN 686 L K++LIGDSGVGKS LL R RT++++G+ +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT ++F N+ W++ + HA N+ +L+GNK D+ + RAV T Q+ A++ G+ F ETSA LNVE+ F +I ++ + ++ ++ T N Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDL-KHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANAN 192
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 150.599 bits (379), Expect = 1.009e-35 Identity = 77/163 (47.24%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 629 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LVGNK+D+ RAVPT + +A A++ + F ETSA + NVEE F +I +I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 1.009e-35 Identity = 77/163 (47.24%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 629 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LVGNK+D+ RAVPT + +A A++ + F ETSA + NVEE F +I +I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 150.599 bits (379), Expect = 1.009e-35 Identity = 77/163 (47.24%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 629 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LVGNK+D+ RAVPT + +A A++ + F ETSA + NVEE F +I +I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 1.009e-35 Identity = 77/163 (47.24%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 629 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LVGNK+D+ RAVPT + +A A++ + F ETSA + NVEE F +I +I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 1.009e-35 Identity = 77/163 (47.24%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 629 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LVGNK+D+ RAVPT + +A A++ G+ F ETSA + NVE F +I +I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 1.009e-35 Identity = 77/163 (47.24%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 629 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LVGNK+D+ RAVPT + +A A++ G+ F ETSA + NVE F +I +I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 1.009e-35 Identity = 77/163 (47.24%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 629 L K++LIGDSGVGKS LL R R+I++DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+ ++ N+ W++ + HA N+ +LVGNK+D+ RAVPT + +A A++ G+ F ETSA + NVE F +I +I Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172 The following BLAST results are available for this feature:
BLAST of FC873385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873385 ID=FC873385; Name=FC873385; organism=Citrus clementina; type=EST; length=832bpback to top |