FC873385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RIT1_HUMAN (GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.464e-18 Identity = 55/165 (33.33%), Postives = 89/165 (53.94%), Query Frame = 3 Query: 147 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ-HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 638 KL+++G GVGKS + ++ KIR I +D + L I DTAGQ F + Y R G ++ Y +TD SF+ +R + + I + +D+ +LVGNK+D+ + R V +G ALA E+ FFETSA +++VF ++ R+I+++ Sbjct: 23 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDL-KQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRK 185
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RASK_ORYLA (GTPase KRas OS=Oryzias latipes GN=kras1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.464e-18 Identity = 55/164 (33.54%), Postives = 89/164 (54.27%), Query Frame = 3 Query: 147 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ-HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 635 KL+++G GVGKS L ++ + + + +DG+ L I DTAGQE + + Y R G L V+ + + SF +I ++ I++ S++V +LVGNK D+ R V T + Q LA +GI F ETSAKT V++ F+++ R+I++ Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPT--RTVDTKQAQDLARSFGIPFIETSAKTRQGVDDAFYTLVREIRK 165
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RYL2_YARLI (Ras-like GTP-binding protein RYL2 OS=Yarrowia lipolytica GN=RYL2 PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.912e-18 Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 147 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADM---DESKRAVPTSKGQALADEY---GIKFFETSAKTNLNVEEVF-FSIARDIKQRLADTDSRAEPQTIR 680 K++L+G GVGK+C + R + + ++ ++LQIWDTAGQERFR++ YYR A +L YDVT +SF+ + W+ ++Q+ S ++ +VG K D+ + S R VP + A E+ E SAK + VEEVF I + + +R AD + Q R Sbjct: 7 KIVLLGAQGVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQIWDTAGQERFRSMAPIYYRSASCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKVDLVKDEPSLREVPFEQCVEYASEWLQDDSCCHEISAKDDEGVEEVFEVIITKLLDKREADEQQKHNSQRQR 191
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.498e-18 Identity = 53/168 (31.55%), Postives = 92/168 (54.76%), Query Frame = 3 Query: 144 IKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 647 ++L ++GD GVGK+ + ++ + + + +D + L I DTAGQ+ I + + G +LVY VT SSF+ I++++ I+ S+ V I++ NK+D+D+ +R V +G+ A+ +G+ F E SAK LN++EVF IA+ +R D Sbjct: 15 MRLCVMGDGGVGKTSITIQFISNHFVNCYDPTIEDLYRKQCL-IDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQIQSFLDQIKFLKSEKVPIIMIANKSDLDD-ERQVTYQEGENFANRFGMSFMEVSAKYKLNIDEVFNQIAQHCVKRRCD 180
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RASK_MONDO (GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.498e-18 Identity = 55/164 (33.54%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 147 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ-HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 635 KL+++G GVGKS L ++ + + + +DG+ L I DTAGQE + + Y R G L V+ + + SF +I ++ I++ S++V +LVGNK D+ R V T + Q LA YGI F ETSAKT ++ F+++ R+I++ Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPS--RTVDTKQAQDLARSYGIPFIETSAKTRQGGDDAFYTLVREIRK 165
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RABL_DICDI (Ras-related protein RabL OS=Dictyostelium discoideum GN=rabL PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.498e-18 Identity = 48/165 (29.09%), Postives = 88/165 (53.33%), Query Frame = 3 Query: 141 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK---------GQALADEYGIKFFETSAKTNLNVEEVF 608 ++K++ +GDS VGK+ L I+ ++++ K + L +WDT GQERF+ + Y+RGA L +D+ +E SF N+ W+ I ++ N+ +LVG K+D+ + +++ ++ Q + D+ + +FETSAK + NV E++ Sbjct: 7 MLKIITLGDSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWDTCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGKWMDEIIKYCYGNIPFVLVGTKSDIPRTDKSISKARIEQWCKNIEDQGIIDK--VHYFETSAKLSQNVTELY 169
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.498e-18 Identity = 55/162 (33.95%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 144 IKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH---ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA 620 +KL+++G GVGK+ LL + + I L +KLQIWDT GQERFR++ + +Y+G+ G +L +DVTD SF + W ++ + +L+GNK D+ + R VP Q E I +FE SAK ++NV + F +A Sbjct: 9 LKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMVLLGNKIDL--ADRKVPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLA 168
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RRAS_HUMAN (Ras-related protein R-Ras OS=Homo sapiens GN=RRAS PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.262e-18 Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 147 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 635 KL+++G GVGKS L ++ + +DG +L I DTAGQE F + Y R G LLV+ + D SFN + + + + + D+ +LVGNKAD+ ES+R VP S+ A + + +FE SAK LNV+E F + R +++ Sbjct: 31 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYT-KICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADL-ESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRK 192
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RIT1_MOUSE (GTP-binding protein Rit1 OS=Mus musculus GN=Rit1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.262e-18 Identity = 54/165 (32.73%), Postives = 89/165 (53.94%), Query Frame = 3 Query: 147 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ-HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 638 KL+++G GVGKS + ++ KIR I +D + L I DTAGQ F + Y R G ++ Y +TD SF+ +R + + I + +D+ +LVGNK+D+ + R V +G +LA E+ FFETSA +++VF ++ R+I+++ Sbjct: 23 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDL-KQLRQVSKEEGLSLAREFSCPFFETSAAYRYYIDDVFHALVREIRKK 185
BLAST of FC873385 vs. ExPASy Swiss-Prot
Match: RAP2C_MOUSE (Ras-related protein Rap-2c OS=Mus musculus GN=Rap2c PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.262e-18 Identity = 58/164 (35.37%), Postives = 93/164 (56.71%), Query Frame = 3 Query: 147 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI---RNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 629 K++++G GVGKS L ++ + + IE+D L+I DTAG E+F ++ Y + G +LVY + ++ SF +I R+ I ++++ + V ILVGNK D+ E +R V +S+G+ALA E+G F ETSAK+ V+E+F I R + Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYR-KEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRY--EKVPLILVGNKVDL-EPEREVMSSEGRALAQEWGCPFMETSAKSKSMVDELFAEIVRQM 164 The following BLAST results are available for this feature:
BLAST of FC873385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873385 ID=FC873385; Name=FC873385; organism=Citrus clementina; type=EST; length=832bpback to top |