FC873396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_PONAB (Histone H2A.Z OS=Pongo abelii GN=H2AFZ PE=2 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 1.729e-48 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_ONCMY (Histone H2A.Z OS=Oncorhynchus mykiss GN=h2afz PE=1 SV=4) HSP 1 Score: 192.971 bits (489), Expect = 1.729e-48 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_MOUSE (Histone H2A.Z OS=Mus musculus GN=H2afz PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.729e-48 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_HUMAN (Histone H2A.Z OS=Homo sapiens GN=H2AFZ PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.729e-48 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_BOVIN (Histone H2A.Z OS=Bos taurus GN=H2AFZ PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.729e-48 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AV_STRPU (Histone H2A.V (Fragment) OS=Strongylocentrotus purpuratus GN=H2A.F/Z PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.950e-48 Identity = 96/114 (84.21%), Postives = 104/114 (91.23%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS+RAG+QFPVGRIHRHLK+R +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 5 KDSGKAKAKAVSRSARAGLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 118
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AV_XENTR (Histone H2A.V OS=Xenopus tropicalis GN=h2afv PE=2 SV=3) HSP 1 Score: 191.815 bits (486), Expect = 3.853e-48 Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS RAG+QFPVGRIHRHLK+R +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AV_XENLA (Histone H2A.V OS=Xenopus laevis GN=h2afv PE=2 SV=3) HSP 1 Score: 191.815 bits (486), Expect = 3.853e-48 Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS RAG+QFPVGRIHRHLK+R +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AV_PAGMA (Histone H2A.V OS=Pagrus major GN=h2afv PE=2 SV=3) HSP 1 Score: 191.815 bits (486), Expect = 3.853e-48 Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS RAG+QFPVGRIHRHLK+R +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AV_MOUSE (Histone H2A.V OS=Mus musculus GN=H2afv PE=1 SV=3) HSP 1 Score: 191.815 bits (486), Expect = 3.853e-48 Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K K + +SRS RAG+QFPVGRIHRHLK+R +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121 The following BLAST results are available for this feature:
BLAST of FC873396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873396 ID=FC873396; Name=FC873396; organism=Citrus clementina; type=EST; length=819bpback to top |