FC873396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_CRYNE (Histone H2A.Z OS=Cryptococcus neoformans GN=HTZ1 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.467e-39 Identity = 80/103 (77.67%), Postives = 95/103 (92.23%), Query Frame = 2 Query: 137 SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 +RSS+AG+QFPVGRIHR L+++ A + R+GA AAVY+ASI+EYLTAEVLELAGNA+KDL+VKRITPRHLQLAIRGDEELD LI+ TIAGGGV+PHIHKSL+ K Sbjct: 24 TRSSKAGLQFPVGRIHRFLRNKNANNVRIGAKAAVYVASIMEYLTAEVLELAGNAAKDLRVKRITPRHLQLAIRGDEELDLLIRATIAGGGVLPHIHKSLVAK 126
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_KLULA (Histone H2A.Z OS=Kluyveromyces lactis GN=HTZ1 PE=3 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 1.794e-37 Identity = 77/115 (66.96%), Postives = 94/115 (81.74%), Query Frame = 2 Query: 110 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 454 KD + S S+RAG+QFPVGR+ R+LK A RVG+ AA+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGD+ELD+LI+ TIA GGV+PHI+K+L+ K K Sbjct: 15 KDSGSLKSQSHSARAGLQFPVGRVKRYLKRNAAGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEK 129
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_YEAST (Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 PE=1 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 2.343e-37 Identity = 78/115 (67.83%), Postives = 93/115 (80.87%), Query Frame = 2 Query: 110 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 454 KD R S S+RAG+QFPVGRI R+LK RVG+ AA+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGD+ELD+LI+ TIA GGV+PHI+K+L+ K K Sbjct: 15 KDSGSLRSQSSSARAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEK 129
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_SCHPO (Histone H2A.Z OS=Schizosaccharomyces pombe GN=pht1 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.343e-37 Identity = 77/105 (73.33%), Postives = 93/105 (88.57%), Query Frame = 2 Query: 134 ISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKT 448 +S S+RAG+QFPVGR+ R LK++ + RVGA +AVY A++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIAGGGV+PHI+K L+ +T Sbjct: 25 MSHSARAGLQFPVGRVRRFLKAKTQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAGGGVLPHINKQLLIRT 129
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_ASHGO (Histone H2A.Z OS=Ashbya gossypii GN=HTZ1 PE=3 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 6.816e-37 Identity = 76/106 (71.70%), Postives = 91/106 (85.85%), Query Frame = 2 Query: 137 SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 454 S S+RAG+QFPVGRI R+LK A RVG+ AA+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGD+ELD+LI+ TIA GGV+PHI+K+L+ K K Sbjct: 24 SHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEK 129
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_YARLI (Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36 Identity = 76/103 (73.79%), Postives = 91/103 (88.35%), Query Frame = 2 Query: 137 SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 S SSRAG+QFPVGRI R++K + RVGA AA+Y+A++LEYLTAEVLELAGNA++DLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+K+L+ K Sbjct: 31 SHSSRAGLQFPVGRIKRYMKKSVQNKVRVGAKAAIYIAAVLEYLTAEVLELAGNAARDLKVKRITPRHLQLAIRGDEELDTLIQATIAYGGVMPHINKALLLK 133
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_LODEL (Histone H2A.Z OS=Lodderomyces elongisporus GN=HTZ1 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.590e-36 Identity = 77/110 (70.00%), Postives = 91/110 (82.73%), Query Frame = 2 Query: 125 KRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 454 K S S+RAG+QFPVGR+ R+LK + RVG+ AA+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K K Sbjct: 19 KSSTSHSARAGLQFPVGRVKRYLKKQAQNKIRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEK 128
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_PICGU (Histone H2A.Z OS=Pichia guilliermondii GN=HTZ1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.383e-36 Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 2 Query: 104 KDKDKDK-KRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 454 K K D K S S+RAG+QFPVGRI R+LK RVG+ +A+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K K Sbjct: 11 KGKSSDSAKASTSHSARAGLQFPVGRIKRYLKRSAQNKVRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEK 128
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_CANAL (Histone H2A.Z OS=Candida albicans GN=HTZ1 PE=3 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 4.418e-36 Identity = 77/110 (70.00%), Postives = 90/110 (81.82%), Query Frame = 2 Query: 125 KRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 454 K S S+RAG+QFPVGR+ R+LK RVG+ AA+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K K Sbjct: 19 KSSTSHSARAGLQFPVGRVKRYLKRNAQNKIRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEK 128
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_PICST (Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 9.843e-36 Identity = 77/110 (70.00%), Postives = 90/110 (81.82%), Query Frame = 2 Query: 125 KRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK 454 K S S+RAG+QFPVGRI R+LK RVG+ +A+YL ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELD LIK TIA GGV+PHI+K+L+ K K Sbjct: 19 KSSTSHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIKATIAYGGVLPHINKALLLKVEK 128 The following BLAST results are available for this feature:
BLAST of FC873396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873396 ID=FC873396; Name=FC873396; organism=Citrus clementina; type=EST; length=819bpback to top |