FC873396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_NEOFI (Histone H2A.Z OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=htz1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.166e-34 Identity = 75/112 (66.96%), Postives = 90/112 (80.36%), Query Frame = 2 Query: 110 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K S S++AG+QFP GR+ R LK+ RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K Sbjct: 16 KDAAGKTQKSHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPFU (Histone H2A.Z OS=Aspergillus fumigatus GN=htz1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.166e-34 Identity = 75/112 (66.96%), Postives = 90/112 (80.36%), Query Frame = 2 Query: 110 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K S S++AG+QFP GR+ R LK+ RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K Sbjct: 16 KDAAGKTQKSHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPCL (Histone H2A.Z OS=Aspergillus clavatus GN=HTZ1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.166e-34 Identity = 75/112 (66.96%), Postives = 90/112 (80.36%), Query Frame = 2 Query: 110 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K S S++AG+QFP GR+ R LK+ RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K Sbjct: 16 KDAAGKTQKSHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_MONAN (Histone H2A.Z OS=Monascus anka GN=HTZ1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.571e-33 Identity = 72/103 (69.90%), Postives = 87/103 (84.47%), Query Frame = 2 Query: 137 SRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 S S++AG+QFP GR+ R LK+ RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K Sbjct: 24 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 126
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPTN (Histone H2A.Z OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=HTZ1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.052e-33 Identity = 74/112 (66.07%), Postives = 89/112 (79.46%), Query Frame = 2 Query: 110 KDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 445 KD K S S++AG+QFP G + R LK+ RVGA AAVY+ ++LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K Sbjct: 16 KDSAGKTQKSHSAKAGLQFPRGSVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2A8_ARATH (Putative histone H2A.8 OS=Arabidopsis thaliana GN=At4g13570 PE=5 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.971e-33 Identity = 70/91 (76.92%), Postives = 76/91 (83.52%), Query Frame = 2 Query: 155 GIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIH 427 G F V RIH+ LK+R++AH VGAT VY+ SILEYLT EVL+LA N SKDLKVKRITPRHLQLAIRGDEELDTLIKGTI GG VIPHIH Sbjct: 28 GEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH 118
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2A_MYTTR (Histone H2A OS=Mytilus trossulus PE=3 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 1.054e-29 Identity = 74/114 (64.91%), Postives = 87/114 (76.32%), Query Frame = 2 Query: 116 KDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 454 K K + SRSSRAG+QFPVGRIHR L+ A GRVGA A VYLA++LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T+ Sbjct: 9 KAKAKAKSRSSRAGLQFPVGRIHRLLRKGNYA-GRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQ 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2A_CHLRE (Histone H2A OS=Chlamydomonas reinhardtii GN=H2A-II PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.348e-29 Identity = 70/111 (63.06%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 125 KRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKTTK 454 K+ +SRS++AG+QFPVGRI R+LK A R+GA A VYLA++LEYLTAEVLELAGNA++D K RI PRH+QLAIR DEEL L+ + TIA GGV+P+IH L+ K TK Sbjct: 12 KKAVSRSAKAGLQFPVGRIARYLKKGKYAE-RIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKKTK 121
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2A2_PSAMI (Late histone H2A.2.1 OS=Psammechinus miliaris PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.067e-29 Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 2 Query: 116 KDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTT 451 K K + SRSSRAG+QFPVGR+HR LK + RVGA A VYLA++LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA GGV+P+I L+ K T Sbjct: 9 KAKSKAKSRSSRAGLQFPVGRVHRFLKKGNYGN-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQTVLLPKKT 120
BLAST of FC873396 vs. ExPASy Swiss-Prot
Match: H2A1A_HUMAN (Histone H2A type 1-A OS=Homo sapiens GN=HIST1H2AA PE=1 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 3.067e-29 Identity = 73/118 (61.86%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 104 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTK 454 K K + + SRSSRAG+QFPVGRIHR L+ A R+GA A VYLA++LEYLTAE+LELAGNAS+D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K T+ Sbjct: 6 KQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTE 122 The following BLAST results are available for this feature:
BLAST of FC873396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873396 ID=FC873396; Name=FC873396; organism=Citrus clementina; type=EST; length=819bpback to top |