FC873448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_RHOS5 (ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpD PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.997e-62 Identity = 122/171 (71.35%), Postives = 138/171 (80.70%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 S G+V QVIGAVVDV+FD GLP IL ALE V++ RLVLEVAQH+GE VRTIAMD TEGLVRG V + G PI+VPVG TLGRI+NVIGEPIDEKG + + IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H G Sbjct: 5 SQGKVTQVIGAVVDVQFDGGLPAILNALETVNNDKRLVLEVAQHLGENTVRTIAMDATEGLVRGAPVTDLGGPISVPVGDATLGRILNVIGEPIDEKGPVSGDSTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSG 175
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_NITHX (ATP synthase subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=atpD PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.608e-62 Identity = 122/169 (72.19%), Postives = 140/169 (82.84%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G +K E IH+EAP + +Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAHGG Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVKDTGNPILVPVGVGTLGRIMNVIGEPVDEQGPVKAEDMRAIHQEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGG 177
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_ZYMMO (ATP synthase subunit beta OS=Zymomonas mobilis GN=atpD PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.449e-62 Identity = 115/175 (65.71%), Postives = 142/175 (81.14%), Query Frame = 3 Query: 270 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 + K +IG++ QVIG VVDV F+E LPP+LTALE + +VLEVAQH+GE VVRTI+MD T+GLVRGQ V++TGS I VPVG TLGRIMNV+G P+DE+G + ++ +PIH +AP F EQ+T+ IL TGIKV+DLLAPY +GGK+GLFGGAGVGKTVLI ELINN+AK HGG Sbjct: 5 SSKKNIGRISQVIGPVVDVLFEEKLPPLLTALETKNQDATVVLEVAQHLGENVVRTISMDTTDGLVRGQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPIHADAPPFTEQSTDTAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGG 179
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_ROSDO (ATP synthase subunit beta OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpD PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.810e-62 Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 ++G++ QVIGAVVDV+F + LP IL ALE ++ RLVLEVAQH+GE VR IAMD TEGLVRGQ V +T PI++PVG TLGRIMNV+GEPIDEKG + T+ IH+EAPAF EQ+T ++L TGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H G Sbjct: 4 AVGKITQVIGAVVDVQFADHLPEILNALETNNNGNRLVLEVAQHLGENTVRAIAMDATEGLVRGQTVTDTDGPISIPVGNATLGRIMNVVGEPIDEKGPVATDETRSIHQEAPAFAEQSTSSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSG 174
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_ERYLH (ATP synthase subunit beta OS=Erythrobacter litoralis (strain HTCC2594) GN=atpD PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.810e-62 Identity = 120/169 (71.01%), Postives = 138/169 (81.66%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 G + QVIGAVVDV+F LP ILTALE + LVLEVAQH+GE VRTIAMDGT+GLVRGQ V+NTG+ I+VPVG TLGRIMNV+GEPID +G + + PIH EAPAFV+Q+T+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLI ELINN+AK HGG Sbjct: 13 GTISQVIGAVVDVQFPGELPAILTALETENGDTTLVLEVAQHLGENTVRTIAMDGTDGLVRGQEVINTGAQISVPVGPKTLGRIMNVVGEPIDMRGPVGADKANPIHAEAPAFVDQSTDAAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGG 181
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_AZOC5 (ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.810e-62 Identity = 121/169 (71.60%), Postives = 138/169 (81.66%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 G++ QVIGAVVDV+FD LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG PI VPVG TLGRIMNVIGE +DE G + E IH++AP++ EQ+TE ++LVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AKAHGG Sbjct: 6 GRITQVIGAVVDVQFDSHLPEILNALETTNQGNRLVLEVAQHLGENTVRTIAMDSTEGLVRGQAVEDTGGPIMVPVGEATLGRIMNVIGEAVDELGPVVGEAKRAIHQQAPSYSEQSTEAEMLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 174
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_YEAST (ATP synthase subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP2 PE=1 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 7.588e-62 Identity = 120/170 (70.59%), Postives = 141/170 (82.94%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 G+V VIGA+VDV F++ LP IL ALE+ +LVLEVAQH+GE VRTIAMDGTEGLVRG++VL+TG PI+VPVGR TLGRI+NVIGEPIDE+G +K++ PIH + P+F EQ+T +IL TGIKVVDLLAPY RGGKIGLFGGAGVGKTV I ELINN+AKAHGG Sbjct: 44 GKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGG 213
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_JANSC (ATP synthase subunit beta OS=Jannaschia sp. (strain CCS1) GN=atpD PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 9.911e-62 Identity = 117/171 (68.42%), Postives = 140/171 (81.87%), Query Frame = 3 Query: 282 SIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 ++G++ QVIGAVVDV+F++ LP IL ALE + RLVLEVAQH+GEG VRTIAMD +EGLVRGQ V +T PITVPVG TLGRI+NV+GEP+DE G + E IH++AP F +Q+TE ++LVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H G Sbjct: 4 AVGKITQVIGAVVDVQFNDHLPEILNALETENDGKRLVLEVAQHLGEGTVRTIAMDSSEGLVRGQEVTDTDGPITVPVGPGTLGRILNVVGEPVDEGGPVDAEERRGIHQDAPEFADQSTEAEVLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSG 174
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_SILPO (ATP synthase subunit beta OS=Silicibacter pomeroyi GN=atpD PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.691e-61 Identity = 118/169 (69.82%), Postives = 136/169 (80.47%), Query Frame = 3 Query: 288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 G+V Q+IGAVVDV+FD+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG PI+VPVG TLGRI+NVIGEP+DEKG + IH+ AP+F EQ+T ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H G Sbjct: 6 GKVTQIIGAVVDVQFDDALPEILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGAVVTDTGGPISVPVGAATLGRILNVIGEPVDEKGPVNATETRAIHQPAPSFDEQSTSSDILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSG 174
BLAST of FC873448 vs. ExPASy Swiss-Prot
Match: ATPB_BARHE (ATP synthase subunit beta OS=Bartonella henselae GN=atpD PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.208e-61 Identity = 119/173 (68.79%), Postives = 141/173 (81.50%), Query Frame = 3 Query: 276 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 794 + ++G + QVIGAVVDV+F+ LP IL ALE + RLVLEVAQH+GE VRTIAMD T+GLVRGQ+V +TG+ I+VPVG TLGRIMNVIGEP+D G + T IH+EAP +VEQ+T +ILVTGIKVVDLLAPY +GGK+GLFGGAGVGKTVLIMELINN+AKAHGG Sbjct: 54 EAAVGVIKQVIGAVVDVQFEGPLPNILNALETDNLGNRLVLEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSKTRSIHQEAPEYVEQSTASEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGG 226 The following BLAST results are available for this feature:
BLAST of FC873448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873448 ID=FC873448; Name=FC873448; organism=Citrus clementina; type=EST; length=795bpback to top |