FC873451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 10 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSP---ALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 YQGG++ + + YP+K P + F +IYH NVD +G+V LD++ +WSP + I +V L ++ NPS +P+ A L + DK ++ E+ R+AK Sbjct: 44 YQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPS--DPLNGEAASLMMRDKNAYENKVKEYCERYAK 148
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 34/104 (32.69%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 10 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL-KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 Y+ F L+I DYP+ PKV F+T I H NV+ G++ L+IL KD W+ +L I ++ ++ + P+ +P +A LY DK +D+ ++ +K Sbjct: 51 YENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIRDYCKTHSK 154
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 10 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 Y+GG F YP PPKV T +YH N+D GNV L+IL++ W P LTI ++ ++ +F P+ +P+ A + ++ +Q Sbjct: 71 YKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 162
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 10 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 Y+GG F YP PPKV T +YH N+D GNV L+IL++ W P LTI ++ ++ +F P+ +P+ A + ++ +Q Sbjct: 71 YKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 162
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 32/89 (35.96%), Postives = 50/89 (56.18%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 267 GTPY GIF + + D+P PPK FLT+I+H NV + G + +++LK W L I VLL ++ + +P+ + + L LE+ Sbjct: 52 GTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPS (Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura pseudoobscura GN=GA22810 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.280e-11 Identity = 35/101 (34.65%), Postives = 52/101 (51.49%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWT 303 GTPY GIF + +T D+P PPK FLT+I+H NV G + ++ LK W P L I +LL ++ + P+ + + + LE + Q A T Sbjct: 55 GTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMT 155
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.280e-11 Identity = 35/101 (34.65%), Postives = 52/101 (51.49%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWT 303 GTPY GIF + +T D+P PPK FLT+I+H NV G + ++ LK W P L I +LL ++ + P+ + + + LE + Q A T Sbjct: 55 GTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMT 155
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2S_DROWI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila willistoni GN=GK16201 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.508e-11 Identity = 34/101 (33.66%), Postives = 53/101 (52.48%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWT 303 GTPY G+F + +T D+P PPK FLT+I+H NV + G + ++ LK W P L I +LL ++ + P+ + + + LE + Q A T Sbjct: 55 GTPYAIGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMT 155 The following BLAST results are available for this feature:
BLAST of FC873451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873451 ID=FC873451; Name=FC873451; organism=Citrus clementina; type=EST; length=646bpback to top |