FC873451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31 Identity = 58/104 (55.77%), Postives = 82/104 (78.85%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PY GG+F + I FP DYPFKPPKVAF T+++H NV+S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y D+AK++ A WT ++A Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.272e-31 Identity = 60/104 (57.69%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PYQGG FFL I FPT+YPFKPPKV F TRIYH NV+S G++ LDIL+ WSPALTI+KVLL++ S+ +P+ +P+VP IA +Y D+ K+++ A EWT ++A Sbjct: 43 SPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.272e-31 Identity = 60/104 (57.69%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PYQGG FFL I FPT+YPFKPPKV F TRIYH NV+S G++ LDIL+ WSPALTI+KVLL++ S+ +P+ +P+VP IA +Y D+ K+++ A EWT ++A Sbjct: 43 SPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.080e-30 Identity = 57/104 (54.81%), Postives = 82/104 (78.85%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PY GG+F + I FP DYPFKPPKVAF T+++H N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y D+AK++ A WT ++A Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.080e-30 Identity = 57/104 (54.81%), Postives = 82/104 (78.85%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PY GG+F + I FP DYPFKPPKVAF T+++H N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y D+AK++ A WT ++A Sbjct: 43 SPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.080e-30 Identity = 57/102 (55.88%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 10 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 YQGG+FFL + FPTDYPFKPPK+AF T+IYH N++S G++ LDIL+ WSPALT++KVLL++ S+ +P+ +P+VP IA +Y DK K+++ A EWT ++A Sbjct: 45 YQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.080e-30 Identity = 57/102 (55.88%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 10 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 YQGG+FFL + FPTDYPFKPPK+AF T+IYH N++S G++ LDIL+ WSPALT++KVLL++ S+ +P+ +P+VP IA +Y DK K+++ A EWT ++A Sbjct: 45 YQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.080e-30 Identity = 57/102 (55.88%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 10 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 YQGG+FFL + FPTDYPFKPPK+AF T+IYH N++S G++ LDIL+ WSPALT++KVLL++ S+ +P+ +P+VP IA +Y DK K+++ A EWT ++A Sbjct: 45 YQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.411e-30 Identity = 60/105 (57.14%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 G+ Y+GG+FFLDI F +YPFKPPKV F TRIYHCN++S G + LDILKD+WSPALTI+KVLL++ S+ T+ + +P+V IA YL+++ +HD++A WT R+A Sbjct: 127 GSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.411e-30 Identity = 56/104 (53.85%), Postives = 82/104 (78.85%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PY GG+F + I FP DYPFKPPKV+F T++YH N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y D++K++ A WT ++A Sbjct: 43 SPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYA 146 The following BLAST results are available for this feature:
BLAST of FC873451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873451 ID=FC873451; Name=FC873451; organism=Citrus clementina; type=EST; length=646bpback to top |