FC873451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.407e-30 Identity = 57/104 (54.81%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PY GG+F + I FP DYPFKPPKVAF T+++H N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y DK K++ A WT ++A Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.407e-30 Identity = 57/104 (54.81%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PY GG+F + I FP DYPFKPPKVAF T+++H N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y DK K++ A WT ++A Sbjct: 43 SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.105e-30 Identity = 55/104 (52.88%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +P+ GG+F + I FP DYPFKPPKVAF T++YH N++S G++ LDILK+ WSPALT++KVLL++ S+ T+P+ +P+VP IAH+Y D+ K++ A WT ++A Sbjct: 43 SPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYA 146
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.194e-29 Identity = 56/104 (53.85%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PY GG+F + I F +DYPFKPPKV F T++YH N+DS G++ LDILK+ WSPA T +KVLL++ S+ T+P+ ++P+VP IAHLY DK+K++ A +WT ++A Sbjct: 44 SPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYA 147
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.045e-25 Identity = 52/105 (49.52%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 GTPY+GG+F L I FPTDYPFKPPK F T IYH N++ G++ ++ILKD W+PAL + KVLL++ + P+ +P+VP I L+ ++ + DQ A E+T R A Sbjct: 48 GTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.197e-21 Identity = 49/106 (46.23%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 GTPY+GG F +DI P DYPF+PPK+ F T+IYH NV S G + LDILKD WSP T+ L++++S+ P NP +A +YL++ + + A EWT +A Sbjct: 45 GTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYA 150
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.564e-21 Identity = 43/104 (41.35%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +P++GG+F L++ P DYP PKV F+T+IYH N+D G + LD+LKD WSPAL I +LL+++++ + P+ +P+ +A L+ ++A+ + A EWT ++A Sbjct: 45 SPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYA 148
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.667e-21 Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PY+GG+F L++ P +YP PKV FLT+IYH N+D G + LDILKD WSPAL I VLL+++++ + P+ +P+ IA + ++A+ + A EWT +A Sbjct: 47 SPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 150
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.549e-21 Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +PY+GG+F L++ P +YP PKV FLT+IYH N+D G + LDILKD WSPAL I VLL+++++ + P+ +P+ IA + ++A+ A EWT +A Sbjct: 47 SPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYA 150
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.014e-20 Identity = 45/106 (42.45%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 GTPY+GG F +DI P +YPFKPPK+ F T++YH N+ S G + LDILK++WSP +T+ L++++++ +P ++P +A YL D+ ++ AA WT +A Sbjct: 44 GTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 149 The following BLAST results are available for this feature:
BLAST of FC873451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873451 ID=FC873451; Name=FC873451; organism=Citrus clementina; type=EST; length=646bpback to top |