FC873451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.263e-19 Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 G+P++ G+F +DI P DYPFKPP + F T+IYH N+ ++ + +WSP L I VL +RS+ T+P+ NP+ IA + D+ ++ A EWT ++AK Sbjct: 43 GSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK 148
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.149e-18 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 10 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 Y+GG F L++ P +YP PP V FLT+IYH NVD G + L LK WSPAL I VLL+++++ P+ +P+ +A ++ E++ + A EWT ++A Sbjct: 46 YEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYA 147
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.337e-17 Identity = 41/109 (37.61%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 TPY+ G+F L++ P YPF+PP++ FLT IYH N+DSAG + LD+L K +W P+L I VL +++ + + P+ +P++ I+ + +K + A +WT + A+ Sbjct: 44 TPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR 152
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.205e-17 Identity = 39/104 (37.50%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 +P++GG F ++ +YP PKV F+T+IYH NVD ++LDILKD WSPAL I VLL+++++ P+ +P+ + + ++A+ + A WT +A Sbjct: 46 SPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYA 149
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.205e-17 Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 TPY+ G+F L++ P YPF+PP+V FLT IYH N+DS+G + LDIL K +W P+L I VL +++ + P+ +P++ I+ + +K + A +WT A+ Sbjct: 44 TPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTEAHAR 152
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.205e-17 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 10 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDS-WSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 Y GG F + FP DYPF+PP + F TRIYH N DS GNV L ILK + P++ + VL + + P+ +P+V IA Y D+ D++A ++ +FAK Sbjct: 51 YAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFAK 154
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.798e-17 Identity = 40/109 (36.70%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 TPY+ G+F L++ P YPF+PP++ FLT IYH N+DSAG + LD+L K +W P+L I +L ++ + P+ +P++ I+ + +K + A +WT + A+ Sbjct: 44 TPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHAR 152
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.282e-15 Identity = 37/105 (35.24%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 7 PYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 PY G F ++I FP +YPFKPPK+ F T+IYH N+D G V L ++ ++W PA +V+ ++ ++ +P +P+ +A Y +D+ K + A E+T ++ + Sbjct: 45 PYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.282e-15 Identity = 37/105 (35.24%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 7 PYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 PY G F ++I FP +YPFKPPK+ F T+IYH N+D G V L ++ ++W PA +V+ ++ ++ +P +P+ +A Y +D+ K + A E+T ++ + Sbjct: 45 PYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.282e-15 Identity = 37/105 (35.24%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 7 PYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 PY G F ++I FP +YPFKPPK+ F T+IYH N+D G V L ++ ++W PA +V+ ++ ++ +P +P+ +A Y +D+ K + A E+T ++ + Sbjct: 45 PYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149 The following BLAST results are available for this feature:
BLAST of FC873451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873451 ID=FC873451; Name=FC873451; organism=Citrus clementina; type=EST; length=646bpback to top |