FC873451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.282e-15 Identity = 37/105 (35.24%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 7 PYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 PY G F ++I FP +YPFKPPK+ F T+IYH N+D G V L ++ ++W PA +V+ ++ ++ +P +P+ +A Y +D+ K + A E+T ++ + Sbjct: 45 PYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.674e-15 Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQL---AAEWTLRFA 315 TPY+GG F L+I P YPF PPKV F+TRI+H N+ S G + LDILKD+W+ A+T+ VLL+++++ +P +A+ + K K+D A WT +A Sbjct: 49 TPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQF---KDKYDLFLLTAKHWTNAYA 153
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15 Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 TPY+GG + L+I P YPF PPKV F+T+I+H N+ S G + LDILKD W+ A+T+ VLL+++++ +P +A+ Y ++ Q A W +A Sbjct: 49 TPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15 Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 TPY+GG + L+I P YPF PPKV F+T+I+H N+ S G + LDILKD W+ A+T+ VLL+++++ +P +A+ Y ++ Q A W +A Sbjct: 49 TPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15 Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 TPY+GG + L+I P YPF PPKV F+T+I+H N+ S G + LDILKD W+ A+T+ VLL+++++ +P +A+ Y ++ Q A W +A Sbjct: 49 TPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.856e-15 Identity = 36/95 (37.89%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 GTP++ G F L I F +YP KPP V FL++++H NV + G++ LDIL++ WSP ++ +L +++S+ P+ ++P A LY E+K ++++ Sbjct: 45 GTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.856e-15 Identity = 36/95 (37.89%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 GTP++ G F L I F +YP KPP V FL++++H NV + G++ LDIL++ WSP ++ +L +++S+ P+ ++P A LY E+K ++++ Sbjct: 45 GTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.856e-15 Identity = 36/95 (37.89%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 GTP++ G F L I F +YP KPP V FL++++H NV + G++ LDIL++ WSP ++ +L +++S+ P+ ++P A LY E+K ++++ Sbjct: 45 GTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.856e-15 Identity = 36/95 (37.89%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 GTP++ G F L I F +YP KPP V FL++++H NV + G++ LDIL++ WSP ++ +L +++S+ P+ ++P A LY E+K ++++ Sbjct: 45 GTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.856e-15 Identity = 36/95 (37.89%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 GTP++ G F L I F +YP KPP V FL++++H NV + G++ LDIL++ WSP ++ +L +++S+ P+ ++P A LY E+K ++++ Sbjct: 45 GTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139 The following BLAST results are available for this feature:
BLAST of FC873451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873451 ID=FC873451; Name=FC873451; organism=Citrus clementina; type=EST; length=646bpback to top |