FC873451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.730e-15 Identity = 35/95 (36.84%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 GTP++ G F L I F +YP KPP V F+++++H NV + G++ LDIL++ WSP ++ +L +++S+ P+ ++P A LY E+K ++++ Sbjct: 45 GTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.730e-15 Identity = 35/95 (36.84%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 GTP++ G F L I F +YP KPP V F+++++H NV + G++ LDIL++ WSP ++ +L +++S+ P+ ++P A LY E+K ++++ Sbjct: 45 GTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.730e-15 Identity = 35/98 (35.71%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAE 297 TP+ GG F L + F DYP KPP V F++R++H N+ + G++ LDIL++ WSP + +L +++S+ +P+ ++P A +Y E+K ++++ E Sbjct: 46 TPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVRE 143
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 258 T Y+ F + + FPTDYP+KPP V F T+ +H NVD+ GN+ LDILKD WSP + +L++++S+ P+ +P+ A L+ Sbjct: 48 TVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLW 132
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 37/105 (35.24%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKH-----DQLAAEWT 303 TP+ GG F L + F DYP KPP V F++R++H N+ + G++ LDIL++ WSP + +L +++S+ +P+ ++P A +Y E K ++ D + WT Sbjct: 46 TPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.310e-15 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 T Y GIF L I P YPF+PP V+F T IYH N+D++G + LDIL K +W P+L I+ VL ++R + + P+ + ++ ++ Y ++ D A E T ++AK Sbjct: 57 TVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYAK 165
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.310e-15 Identity = 34/98 (34.69%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAE 297 TP+ GG F L + F DYP KPP V F++R++H N+ + G++ LDIL++ WSP + +L +++S+ +P+ ++P A ++ E+K ++++ E Sbjct: 46 TPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 143
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 8.310e-15 Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVA---------------FLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 315 GTPY GG F + + P YPF+PPKV F+TRI+H N+ S G + LDILKD W+ +LT+ VLL++++M +P +P +A ++ + A WT FA Sbjct: 62 GTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFA 182
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.085e-14 Identity = 34/98 (34.69%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAE 297 TP+ GG F L + F DYP KPP V F++R++H N+ + G++ LDIL++ WSP + +L +++S+ +P+ ++P A ++ E K ++++ E Sbjct: 46 TPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVRE 143
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.851e-14 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 285 TP++ G F L I F +YP KPP V F+++++H NV + G + LDIL++ WSP ++ +L +++S+ ++P+ ++P A LY E++ ++++ Sbjct: 46 TPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEK 139 The following BLAST results are available for this feature:
BLAST of FC873451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873451 ID=FC873451; Name=FC873451; organism=Citrus clementina; type=EST; length=646bpback to top |