FC873451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.851e-14 Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 7 PYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 318 PY G F ++I FP YPF PPK+ F T+IYH NVD G V L I+ D+W P +VL A+ ++ NP +P+ +A ++ + K + A E+T + A+ Sbjct: 45 PYNKGAFRIEINFPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHKKFMKTAEEFTKKNAE 149
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.851e-14 Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAE 297 TP+ GG F L + F DYP KPP V F++R++H N+ + G++ LDIL++ WSP + VL +++S+ +P+ +P A L+ E+K ++++ E Sbjct: 46 TPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIE 143
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.851e-14 Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 258 T ++G + L ++F DYPFKPPKV F T +H NVD GN+ LDIL+D WS A + +LL+++S+ P++ +P+ A L+ Sbjct: 77 TVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW 161
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.158e-14 Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKH 279 TPY G F + + FP +YPF PP + FL+ ++H NVD +GN+ LDILK+ WS + +LL+++S+ P+ +P+ A L+ D ++ Sbjct: 51 TPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEY 142
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.387e-14 Identity = 34/95 (35.79%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQL 288 T Y+G F + ++FP +YP+ PP + F + ++H NVD +GN+ LDILKD WS + +LL+++S+ P+ +P+ A L+ +D ++ +L Sbjct: 71 TYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRL 165
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 258 T ++G + L +TF DYPFK PKV F T +H NVD GN+ LDIL+D WS A + +LL+++S+ P++ +P+ A L+ Sbjct: 78 TVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW 162
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14 Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 258 GT Y+ + L + FP+ YP+ P V FLT YH NVD+ GN+ LDILKD WS + +LL+++S+ P++ +P+ A L+ Sbjct: 71 GTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW 156
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14 Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 258 GT Y+ + L + FP+ YP+ P V FLT YH NVD+ GN+ LDILKD WS + +LL+++S+ P++ +P+ A L+ Sbjct: 71 GTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW 156
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14 Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 1 GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 258 GT Y+ + L + FP+ YP+ P V FLT YH NVD+ GN+ LDILKD WS + +LL+++S+ P++ +P+ A L+ Sbjct: 71 GTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW 156
BLAST of FC873451 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14 Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 4 TPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVD-SAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPI 234 TPY+GG+F L + P YP +PP+V FLT+I+H NV G + LDILK++WSPA T+ V A+ ++ +P +P+ Sbjct: 47 TPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124 The following BLAST results are available for this feature:
BLAST of FC873451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873451 ID=FC873451; Name=FC873451; organism=Citrus clementina; type=EST; length=646bpback to top |