FC873453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873453 vs. ExPASy Swiss-Prot
Match: ZIP12_ARATH (Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.913e-20 Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 2 Query: 257 DDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCL-PEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQ 592 + A+A K +A SILI+G+ GV +P+ G LKT+ + F+ KAFAAGVILATGFVH+L +E+L + CL E PW FP G AM AS+LT+L++ + Y R + Sbjct: 42 EKASALKYKIIAFFSILIAGVFGVCLPIFG-----LKTESNFFMYVKAFAAGVILATGFVHILPDATESLTSSCLGEEPPWGDFPMTGLVAMAASILTMLIESFASGYLNRSR 149
BLAST of FC873453 vs. ExPASy Swiss-Prot
Match: ZIP7_ARATH (Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.804e-20 Identity = 51/135 (37.78%), Postives = 79/135 (58.52%), Query Frame = 2 Query: 251 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQGRVRSVDEDSDS 655 C ++ A LK +AI SIL++ ++GV++PL + L D + V K A+GVILATGF+H+L + L + CLPE PW KFPF F M+++LL L+++ Y R R ++ +G V ++ S+S Sbjct: 46 CHNNKEAQKLKIIAIPSILVASMIGVSLPLFSRSIPALGPDREMSVIVKTLASGVILATGFMHVLPDSFDDLTSKCLPEDPWQKFPFATFITMISALLVLMIESFAMCAYAR-----RTSKREGEVVPLENGSNS 175
BLAST of FC873453 vs. ExPASy Swiss-Prot
Match: ZRT2_YEAST (Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae GN=ZRT2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11 Identity = 54/174 (31.03%), Postives = 79/174 (45.40%), Query Frame = 2 Query: 242 REDCRDDAAAFN-------LKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCL----PEFPWSKFPFPGFFAMVASLLTLLLDFVGTQYYERKQGLTRATEEQGRVRSVDEDSDSGIVPVLEIKDRNVKVFGEEEGGGMH 730 R+D D A N L+ +A+ ILIS +GV P++ F++ F K F +GVI+AT FVH+L +EAL + CL E+PW+ F + SL L + T Y+ K L + G V S+D D+ S V+ D + F E +H Sbjct: 7 RDDSVDTCQASNGYNGHAGLRILAVFIILISSGLGVYFPILSSRYSFIRLPNWCFFIAKFFGSGVIVATAFVHLLQPAAEALGDECLGGTFAEYPWA------FGICLMSLFLLFFTEIITHYFVAKT-LGHDHGDHGEVTSIDVDAPSSGF-VIRNMDSDPVSFNNEAAYSIH 172
BLAST of FC873453 vs. ExPASy Swiss-Prot
Match: ZIP6_ARATH (Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.191e-11 Identity = 39/111 (35.14%), Postives = 58/111 (52.25%), Query Frame = 2 Query: 251 CRDDAAAFNLKFVAIASILISGIVGVAIP-LIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEAL-DNPCLPEFPWSKFPFPGFFAMVASLLTLLLDFVGTQY 577 CRD A +LK VA+ +I ++ + GV P L+ K+ + K FAAGVIL+T VH+L E+L D PW FPF G M+ ++ LL+D +++ Sbjct: 17 CRDGEEASHLKIVAVFAIFLTSVFGVWGPVLLAKYFHGKPLYDKAILVIKCFAAGVILSTSLVHVLPEAFESLADCQVSSRHPWKDFPFAGLVTMIGAITALLVDLTASEH 127 The following BLAST results are available for this feature:
BLAST of FC873453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873453 ID=FC873453; Name=FC873453; organism=Citrus clementina; type=EST; length=745bpback to top |