FC873460

Overview
NameFC873460
Unique NameFC873460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10158 contig Ccv1_Contig10158:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMA (Chaperone protein dnaJ OS=Prochlorococcus marinus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.847e-41
Identity = 87/216 (40.28%), Postives = 116/216 (53.70%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE--YDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPDINK  GAEE+FKEI  AYEVL D EKR+ YD+FGEAG+ G      + +     D FE + +                              D+RYDL + F +++FG +R I++   ETCD C GTGAK      +C  C G G V +  RTPFG  +QVS C  C G G++I D C+ CGG G  Q ++ +++ IP GV  G  ++
Sbjct:   26 LARQYHPDINKEAGAEERFKEIGRAYEVLGDPEKRARYDQFGEAGLGGSAGMPDMGDMGGFADIFETFFSGFGGPGSSGARTQRRGPQQGD---------DLRYDLTIDFNQAVFGQEREIKIPHLETCDVCRGTGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSDCPTCSGSGQVISDSCQSCGGQGVKQVRKKLRINIPAGVDTGTRLR 232          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMP (Chaperone protein dnaJ OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.974e-41
Identity = 88/216 (40.74%), Postives = 119/216 (55.09%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE--YDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPD+NK PGAE+KFKEI  AYE L+D E R+ YD+FGEAGI G      + +     D FE +               ++               D+RYDL++ F+++IFG QR I +   ETC+ C GTGAK      +C  C G G V +  RTPFG  +QV+ C  C G G+II D C  CGGNG  Q ++ +++ IP GV +G  ++
Sbjct:   26 LARQYHPDVNKDPGAEDKFKEIGKAYEALADPETRARYDQFGEAGIGGAAGMPDMGDMGGFGDLFETF---------FNGFGGQSSQGGRSQRRGPQQGDDLRYDLNIDFKDAIFGQQREINIPHLETCEVCRGTGAKKGTGPTTCTTCGGSGQVRRATRTPFGNFTQVAECPTCNGVGQIISDPCTSCGGNGVKQVRKKLRINIPAGVDSGTKLR 232          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_GLOVI (Chaperone protein dnaJ OS=Gloeobacter violaceus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.222e-40
Identity = 83/218 (38.07%), Postives = 124/218 (56.88%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPF----ELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPD+NK  GAE+ FKE+S AYEVLSDD++R+ YDRFGEAG+ G   G      G   F    +++ +              A               D+RYD+ L F+E+IFGG++ I ++   TC++C G+G+K  +   +C+ C G+G + + +RTPFGL +QV+ C  C G G++I   C  C G G  Q + ++K+ IP GV  G+ ++
Sbjct:   27 LARQYHPDVNKDAGAEDTFKELSRAYEVLSDDDQRARYDRFGEAGLNGGVGGGPGDFAGAAGFGDISDIFESFFGGFAGAGTGGRRATRPGGPTRGD-----DLRYDMVLEFQEAIFGGEKEITINHLITCETCRGSGSKPGSGPMTCRNCGGQGQIRQARRTPFGLFTQVAACPNCQGTGEVIESPCPTCSGRGRNQKQTTIKITIPAGVDAGSRLR 239          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein dnaJ 1 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.222e-40
Identity = 87/218 (39.91%), Postives = 119/218 (54.59%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG---EYDGLSNTSQGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAEEKFKEI+ AYEVLS+ E R  YD+FGEAG++G   +   + N     D FE ++                A               D+R DL L+F+E+IFGG++ I +   E+C  C GTGAK    +++C  C G G V +  RTPFG  +QVS C  C G G++I   C  C G G  Q  + +K+ IP GV +G  ++
Sbjct:   27 LARKYHPDVNKEPGAEEKFKEINRAYEVLSEPEIRQRYDQFGEAGVSGGGAQGFDVGNMGDFADIFETIFGGFGGGMGGQQRGRRRANGPTRGD--------DLRLDLQLTFQEAIFGGEKEIRIPHLESCQVCEGTGAKPGTGVKTCGTCNGAGQVRRATRTPFGSFAQVSACPTCNGSGEVIEQKCEACNGVGRKQETKKLKITIPAGVDDGTRLR 236          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_NOSP7 (Chaperone protein dnaJ OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.950e-40
Identity = 82/214 (38.32%), Postives = 115/214 (53.74%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAE++FKEI+ AYEVLS+ E R+ YDRFG  G++G   G  +        +++ +             +                D+R DL L F E++FGG++ I +S  E C+ C G+GAK     ++C  C G G V +  RTPFG  +QVSTC  C G G +I D C  C G G  Q  + +K+ IP GV NG  ++
Sbjct:   27 LARKYHPDVNKEPGAEDRFKEINRAYEVLSEPETRARYDRFGPEGVSGAGAGFQDVGDMGGFADIFESIFSGFAGGMGSPTQQRRRSGPARGD-----DLRLDLKLDFREAVFGGEKEIRISHLENCEVCSGSGAKPGTRPRTCSTCSGSGQVRRVTRTPFGSFTQVSTCPTCNGTGMVIEDKCDACDGKGANQVTKKLKITIPAGVDNGTRLR 235          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_TRIEI (Chaperone protein dnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 85/217 (39.17%), Postives = 120/217 (55.30%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG-EYDGLSN--TSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PG+EE+FKEI+ AYE+LSD E ++ +DRFGEAG++G    G S   +    D FE + +                              D+R DL+L F E+IFGG + + +   ETC +C G+GAK     Q+C  C G G V +  RTPF   +QVS C  C G G+II + C  CGG G+ ++ + +K+ IP GV NG  ++
Sbjct:   27 LARKYHPDVNKEPGSEERFKEINRAYEILSDPEMKARFDRFGEAGVSGGAASGFSTDFSDSFADIFESFFSGFGGAGTQGRRRTGPVRGD-----------DLRLDLNLEFIEAIFGGDKELTIKHLETCGTCNGSGAKPGTKPQTCSTCGGTGQVRRATRTPFSSFTQVSVCPSCNGSGQIIEEKCVDCGGRGQKEATKKIKITIPGGVDNGTRLR 232          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMM (Chaperone protein dnaJ OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 85/216 (39.35%), Postives = 117/216 (54.17%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE--YDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPDINK PGAE++FKEI  AYEVLSD + R  YD+FGEAG+ G      + +     D FE + +                              D+RYDL + FE+++FG +R I++   ETCD+C GTGAK  +   +C  C G G V +  RTPFG  +QV+ C  C G G++I D C  C G G  Q ++ +++ IP GV  G  ++
Sbjct:   26 LARQYHPDINKDPGAEDRFKEIGRAYEVLSDPQTRGRYDQFGEAGLGGAAGMPDVGDMGGFADLFETFFSGFGGAGGSGGARPRRRGPQQGD--------DLRYDLKIDFEQAVFGQEREIKIPHLETCDTCNGTGAKVGSGPTTCSTCGGVGQVRRATRTPFGSFTQVAECPSCEGTGQVIADPCPACAGQGVRQVRKKLRINIPAGVDTGTRLR 233          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP7 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 85/217 (39.17%), Postives = 116/217 (53.46%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT-GEYDGLSNTSQG--VDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK  GAEE+FKEI+ AYE+LS+ E R+ YDRFGEAG++ G   G      G   D FE   +                              D+R D  L+F E++FGG++ I +   ETC  C G+GAK     ++C  C G G V +  RTPFG  +QVS C  C G G++I + C  CGG+G  Q  + +K+ IP GV NG  ++
Sbjct:   27 LARKYHPDVNKEIGAEERFKEINRAYEILSEPETRARYDRFGEAGVSSGAGSGFEYGDMGGIADIFETIFSGFGGMGTGTSSRRRTGPVRGD---------DLRLDFKLNFREAVFGGEKEIRIRHLETCQVCEGSGAKPGTGSRTCSTCSGSGQVRRATRTPFGTFAQVSVCPTCNGSGEVIEEKCEACGGSGRKQETKKLKITIPAGVDNGTRLR 234          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.103e-39
Identity = 87/216 (40.28%), Postives = 119/216 (55.09%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT---GEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  +YHPD+N  PG   AE+KFKEI+ AYE+LSD +KR+ YD+FG A       +  G  +  +G   F+                                  DIRYDL L+FEE+ FG ++ IEV  FE CD C GTG K  +  ++C  C G G + +TQ TPFG I  + TC +C G+GKII D C++CGG G+++ +R +KV IP G+  G
Sbjct:   28 LAKKYHPDLN--PGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFEQGGSQQGGFGDFGEGGFDFDFGGFGDIFGDIFSDFFGTGRRKAEKGPKKGA---DIRYDLTLTFEEAAFGTEKEIEVERFEVCDVCHGTGVKPGSRPETCPVCHGTGEIRQTQNTPFGRIVNIRTCPRCHGEGKIITDPCQKCGGTGKIRKRRKIKVTIPAGIDEG 238          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ACAM1 (Chaperone protein dnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.103e-39
Identity = 82/218 (37.61%), Postives = 116/218 (53.21%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE----YDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAE+KFKEI+ AYE LSD + R  YD+FGEAG++      Y    +     D FE + +                              D+R+DL L F E++FGG++ I +S  E+C +C GTGAK     Q+C  C G G V +  RTP G  +QVS C  C G G+++ + C  CGG G+ Q  + +++ IP GV  G  ++
Sbjct:   27 LARKYHPDVNKEPGAEDKFKEINKAYETLSDPQMRGRYDQFGEAGVSSAAGAGYQDFGDFGGFADIFETFFSGFGGSPQSGRRRSGPARGE-----------DLRFDLKLKFREAVFGGEQQIRISHLESCKTCEGTGAKPGTRPQTCSTCQGSGQVRRMTRTPLGNFTQVSVCPTCNGQGQVVTEKCDSCGGRGQNQVSKKLQIKIPAGVDTGTRLR 233          
The following BLAST results are available for this feature:
BLAST of FC873460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PROMA5.847e-4140.28Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_PROMP9.974e-4140.74Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_GLOVI2.222e-4038.07Chaperone protein dnaJ OS=Gloeobacter violaceus GN... [more]
DNAJ1_SYNY32.222e-4039.91Chaperone protein dnaJ 1 OS=Synechocystis sp. (str... [more]
DNAJ_NOSP74.950e-4038.32Chaperone protein dnaJ OS=Nostoc punctiforme (stra... [more]
DNAJ_TRIEI6.465e-4039.17Chaperone protein dnaJ OS=Trichodesmium erythraeum... [more]
DNAJ_PROMM6.465e-4039.35Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_CYAP76.465e-4039.17Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_THETN1.103e-3940.28Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]
DNAJ_ACAM11.103e-3937.61Chaperone protein dnaJ OS=Acaryochloris marina (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873460 ID=FC873460; Name=FC873460; organism=Citrus clementina; type=EST; length=691bp
TAACGGCACCAGCTATAATCTTTTTGATTTTGTTAATGTCTTCTTGTTTT
GATTATGCAGTATCATCCGGATATCAACAAGAGTCCTGGAGCTGAAGAGA
AGTTCAAAGAGATAAGTTCTGCGTATGAGGTCCTTTCAGATGATGAGAAA
AGATCTGTATATGATCGCTTTGGTGAGGCAGGTATAACTGGAGAATATGA
TGGATTGAGCAACACTTCACAGGGGGTGGATCCTTTTGAATTATATAGTG
CATTCTTTGGTGGTTCAGATGGGCTCTTTGGAGGAGTGGGTGAGGCCGGA
GGCATTAACTTCAATTTTGGAAACAAAGGAAATTTTGGTCTTGACATTCG
GTATGACCTGCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGTG
GGATTGAAGTTTCTTGTTTTGAAACATGTGATAGTTGTGGTGGAACTGGT
GCCAAATCTAGTAATTGCATACAATCATGTAAAGCTTGTTGGGGTAGAGG
AGGAGTACTGAAAACTCAGAGAACACCATTTGGATTAATCTCACAGGTAT
CTACATGCTCTAAGTGTGGTGGTGATGGTAAGATAATAATTGATCATTGC
CGAAGATGTGGTGGTAATGGTGAAGTACAGTCAAAAAGAAGTATGAAAGT
GGTTATCCCACCTGGTGTTAGTAACGGAGCCACCATGCAAA
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