FC873460

Overview
NameFC873460
Unique NameFC873460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10158 contig Ccv1_Contig10158:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP8 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 8801) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.440e-39
Identity = 85/214 (39.72%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK  GAE++FKEI+ AYEVLS+ E R+ YD+FGEAG++G        + G D  ++                                 D+R DL L F E+IFGG++ I +   ETC  C G+GAK     ++C  C G G V +  RTPFG  +QVSTC  C G G++I   C  CGG G  Q  + +K+ IP GV NG  ++
Sbjct:   27 LARKYHPDINKEAGAEDRFKEINRAYEVLSEPETRARYDQFGEAGVSGA------GAAGFDYGDMGGFADIFETIFSGFGGGVGTGSTRRRTGPTRGDDLRLDLKLDFREAIFGGEKEIRIPHLETCQVCNGSGAKPGTGSRTCSTCNGAGQVRRATRTPFGSFAQVSTCPDCNGAGQVIEQKCDACGGAGRKQETKKLKITIPAGVDNGTRLR 234          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAA5 (Chaperone protein dnaJ OS=Cyanothece sp. (strain ATCC 51142) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39
Identity = 84/218 (38.53%), Postives = 115/218 (52.75%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG----EYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK PGAEE+FKEI+ AYEVLS+ + RS YD+FGEAG++G     Y  + +     D FE   +                              D+R DL L F E++FGG++ I +   ETC  C G GAK     ++C  C G+G V +  RTPFG  +QVS C  C G G++I + C  C G G  Q    +K+ IP GV +G  ++
Sbjct:   27 LARKYHPDVNKEPGAEERFKEINRAYEVLSEPDTRSRYDQFGEAGVSGAGGFNYGDMGDMGGFADIFETIFSGFGGGMGTGGTRRRTGPVKGD---------DLRLDLKLDFREAVFGGEKEIRIPHLETCQVCKGDGAKPGTGAKTCSTCNGQGQVRRATRTPFGSFAQVSACPACNGQGQVIEEKCEVCNGAGRRQVTEKVKITIPAGVDDGTRLR 235          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.080e-38
Identity = 89/220 (40.45%), Postives = 120/220 (54.55%), Query Frame = 1
Query:   49 LIMQYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQ----GVDP-FELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK  P AEEKFKEIS AYE+LSD +KR+ YD++G AGI  E     + +Q    G D  F+++                                D++Y + + FE++ FG  + I +   ETCD+C GTGAK     ++C  C G G V  TQRTPFG  +Q  TC +CGG G II D C  C G+G+V+ +R + V IPPGV  G  ++
Sbjct:   29 LARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKRARYDQYGHAGINEEDFNFEDFAQRGFGGFDDIFDMFFGGGMGRRRRGPRPGA----------------DLQYRMKIPFEDAAFGTTKKITIPRTETCDTCNGTGAKPGTSPKTCPQCNGSGQVRYTQRTPFGQFAQTRTCDRCGGRGTIIDDPCPTCQGSGKVRKQRKITVKIPPGVDTGTRLR 232          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.051e-38
Identity = 93/225 (41.33%), Postives = 114/225 (50.67%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA--------GITG---EYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPDINK+P A EKFKEI  AYEVLSDDEKR+ YDRFG A        G  G   ++ G S      D FE +                                D+ Y + L+FEE+ FG +  IEV   ETCD+C G+GAK     QSC  C G G V   Q TPFG I    TC  CGG G+ I + C  CGG G V+ ++ + V IP GV +G  ++
Sbjct:   28 LSKQYHPDINKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNEAFGGGFQGGGFDFGGFSGFGGFEDIFETFFGGGSRRRASGPRKGA----------------DLEYMMTLTFEEAAFGKETEIEVPHEETCDTCHGSGAKPGTSPQSCPHCHGSGQVTSEQATPFGRIVNRRTCPVCGGTGRHIPEKCPTCGGTGHVKKRKKIHVKIPAGVDDGQQLR 236          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37
Identity = 86/214 (40.19%), Postives = 108/214 (50.47%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPD+NK+P A EKFKEI  AYEVLSDDEKR+ YDRFG A     + G      G D    +                                D+ Y + L+FEE+ FG +  IE+   ETCD+C G+GAK      SC  C G G V   Q TPFG I    TC  CGG G+ I + C  CGG G V+ ++ + V IP GV +G  ++
Sbjct:   28 LSKQYHPDVNKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNETFGGGGFQGGGFD----FGGFSGFGGFEDIFETFFGAGPRRRASGPRKGADVEYMMTLTFEEAAFGKETEIEIPREETCDTCQGSGAKPGTSPTSCPHCHGSGQVTSEQATPFGRIVNRRTCPVCGGTGRYIPEKCPTCGGTGRVKRRKKIHVKIPAGVDDGQQLR 237          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_BACTR (Chaperone protein dnaJ OS=Bacillus thermoglucosidasius GN=dnaJ PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.141e-36
Identity = 81/214 (37.85%), Postives = 111/214 (51.87%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK P A EKFKEI  AYEVLSDD+KR+ YD+FG A     + G  +       F  +S                               D++Y + L+FEE++FG +  IE+   ETC++C GTGAK     ++C  C G G +   Q TPFG I    TC  CGG G+ I + C  CGG G V+ ++ + V IP G+ +G  ++
Sbjct:   28 LSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGHADPNQGFGGFRSDDFDFGGFSGFSGFDDIFSTFFGGGRR------RDPNAPRAGADLQYTMTLTFEEAVFGKETDIEIPREETCNTCHGTGAKPGTKKETCSYCHGTGQISTEQSTPFGRIVNRRTCPYCGGTGQYIKERCTTCGGTGRVKRRKKIHVKIPAGIDDGQQLR 235          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_METMA (Chaperone protein dnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.947e-36
Identity = 85/220 (38.64%), Postives = 115/220 (52.27%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVD------PFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L +QYHPD NK PGAEEKFKEIS AY VLSD EKR+ YDRFG AGI  +Y    +  +G D       FE++                                D++YDL+++FEE+ FG ++ I++   E C +C GTGAK     + C  C G G V  T+ T        +TCS C G G+++   C  C G G V+S+R M V +P G  +G T++
Sbjct:   29 LALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSA-EDIFRGADFGGFGDIFEMFFGGGRRGGPMGPRRGS----------------DLQYDLYVTFEEAAFGVRKDIDIPRTERCSTCSGTGAKPGTSPKRCPNCGGTGQVRTTRSTLGMQFVSTTTCSACHGRGQVVESPCPTCSGAGRVRSRRKMSVNVPAGADSGMTLR 231          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein dnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.947e-36
Identity = 85/221 (38.46%), Postives = 114/221 (51.58%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTS------QGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK P A EKFKEI  AYEVLSDD+KR+ YD+FG A     + G  +         G   FE ++S               A               D++Y + L+FEE+ FG +  IE+   ETCD+C GTGAK     ++C  C G G +   Q TPFG I    TC  CGG G+ I + C  CGG G V+ ++ + V IP G+ +G  ++
Sbjct:   28 LSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGHADPNQGFGGFRSDDFDFGGFSGFGGFEDIFSTFFGGGRRRDPNAPRAGA-------------DLQYTMTLTFEEAAFGKETDIEIPREETCDTCHGTGAKPGTKKETCSYCHGTGQISTEQSTPFGRIVNRRTCPYCGGTGQYIKEKCTTCGGTGRVKKRKKIHVKIPAGIDDGQQLR 235          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein dnaJ OS=Methanosarcina acetivorans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.542e-36
Identity = 85/220 (38.64%), Postives = 117/220 (53.18%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVD------PFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L +QYHPD NK PGAE+KFKEIS AY VLSD EKR+ YDRFG AGI  +Y    +  +G D       FE++                                D++YDL+++FEE+ FG ++ I++   E C +C GTGAK     + C  C G G V  T+ T        +TCS C G G+II   C  CGG G V++KR++ V +P G  +G +++
Sbjct:   29 LALQYHPDRNKDPGAEDKFKEISEAYAVLSDTEKRAQYDRFGHAGIDNQYSA-EDIFRGADFGGFGDIFEMFFGGGRRGGPMGPRRGS----------------DLQYDLYITFEEAAFGVRKDIDIPRTERCSTCSGTGAKPGTSPKRCPTCGGTGQVRTTRSTLGMQFISTTTCSTCHGRGQIIESPCPVCGGAGRVRNKRTITVNVPAGADSGMSLR 231          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.336e-36
Identity = 79/214 (36.92%), Postives = 111/214 (51.87%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+NK P A EKFKEI  AYEVLSDD+KR+ YD+FG+A     + G  +    +  F  +                                D++Y + L+FEE+ FG +  IE+   ETC++C GTGAK     ++C  C G G +   Q TPFG I    TC  CGG G+ I + C  CGG G V+ ++ + V IP G+ +G  ++
Sbjct:   28 LSKKYHPDVNKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGQADPNQGFGGFRSDDFDLGGFSGFGGFEDIFNTFFGGGRRRNPNAPRAGA------DLQYTMTLTFEEAAFGKETDIEIPSEETCNTCHGTGAKPGTKPETCPHCHGAGQISTEQSTPFGRIVNRRTCPYCGGTGQYIKEKCTTCGGTGRVKRRKKIHVKIPAGIDDGQQLR 235          
The following BLAST results are available for this feature:
BLAST of FC873460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CYAP81.440e-3939.72Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_CYAA52.457e-3938.53Chaperone protein dnaJ OS=Cyanothece sp. (strain A... [more]
DNAJ_HALOH2.080e-3840.45Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_GEOTN6.051e-3841.33Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNAJ_GEOKA2.299e-3740.19Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ_BACTR1.141e-3637.85Chaperone protein dnaJ OS=Bacillus thermoglucosida... [more]
DNAJ_METMA1.947e-3638.64Chaperone protein dnaJ OS=Methanosarcina mazei GN=... [more]
DNAJ_GEOSW1.947e-3638.46Chaperone protein dnaJ OS=Geobacillus sp. (strain ... [more]
DNAJ_METAC2.542e-3638.64Chaperone protein dnaJ OS=Methanosarcina acetivora... [more]
DNAJ_BACST4.336e-3636.92Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873460 ID=FC873460; Name=FC873460; organism=Citrus clementina; type=EST; length=691bp
TAACGGCACCAGCTATAATCTTTTTGATTTTGTTAATGTCTTCTTGTTTT
GATTATGCAGTATCATCCGGATATCAACAAGAGTCCTGGAGCTGAAGAGA
AGTTCAAAGAGATAAGTTCTGCGTATGAGGTCCTTTCAGATGATGAGAAA
AGATCTGTATATGATCGCTTTGGTGAGGCAGGTATAACTGGAGAATATGA
TGGATTGAGCAACACTTCACAGGGGGTGGATCCTTTTGAATTATATAGTG
CATTCTTTGGTGGTTCAGATGGGCTCTTTGGAGGAGTGGGTGAGGCCGGA
GGCATTAACTTCAATTTTGGAAACAAAGGAAATTTTGGTCTTGACATTCG
GTATGACCTGCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGTG
GGATTGAAGTTTCTTGTTTTGAAACATGTGATAGTTGTGGTGGAACTGGT
GCCAAATCTAGTAATTGCATACAATCATGTAAAGCTTGTTGGGGTAGAGG
AGGAGTACTGAAAACTCAGAGAACACCATTTGGATTAATCTCACAGGTAT
CTACATGCTCTAAGTGTGGTGGTGATGGTAAGATAATAATTGATCATTGC
CGAAGATGTGGTGGTAATGGTGAAGTACAGTCAAAAAGAAGTATGAAAGT
GGTTATCCCACCTGGTGTTAGTAACGGAGCCACCATGCAAA
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