FC873460

Overview
NameFC873460
Unique NameFC873460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10158 contig Ccv1_Contig10158:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LYSSC (Chaperone protein dnaJ OS=Lysinibacillus sphaericus (strain C3-41) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.664e-36
Identity = 84/215 (39.07%), Postives = 119/215 (55.35%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGE----AGITGEYDGLSNTSQGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  QYHPD+NK PGA+EKFKEI+ AYEVLSDD+K++ YD+FG     AG  G + G      G   FE ++S+                              D++Y +++ FEE+IFG +  IE+   ETC++C G+GAK     ++C  C G G + +   TPFG +    +C+ C G GKII + C  C G G+VQ ++ +KV IP GV +G
Sbjct:   28 LSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKARYDQFGHEDPNAGFGGGFGG-----GGFGGFEDIFSSFFGGGGRRQDPNAPRKGD------------DLQYRMNIKFEEAIFGKETEIEIPKDETCETCHGSGAKPGTQPETCSTCNGAGQINQAVDTPFGRMMNRRSCTTCHGTGKIIKEKCSTCRGEGKVQKRKKIKVSIPAGVDDG 225          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSH (Chaperone protein dnaJ OS=Bacillus sphaericus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.664e-36
Identity = 84/215 (39.07%), Postives = 119/215 (55.35%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGE----AGITGEYDGLSNTSQGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  QYHPD+NK PGA+EKFKEI+ AYEVLSDD+K++ YD+FG     AG  G + G      G   FE ++S+                              D++Y +++ FEE+IFG +  IE+   ETC++C G+GAK     ++C  C G G + +   TPFG +    +C+ C G GKII + C  C G G+VQ ++ +KV IP GV +G
Sbjct:   24 LSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKARYDQFGHEDPNAGFGGGFGG-----GGFGGFEDIFSSFFGGGGRRQDPNAPRKGD------------DLQYRMNIKFEEAIFGKETEIEIPKDETCETCHGSGAKPGTQPETCSTCNGAGQINQAVDTPFGRMMNRRSCTTCHGTGKIIKEKCSTCRGEGKVQKRKKIKVSIPAGVDDG 221          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSS1 (Chaperone protein dnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.397e-36
Identity = 85/214 (39.72%), Postives = 110/214 (51.40%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPD+NK+P AE KFKEI+ AYEVLSD EKRS+YDRFG AG T         + G DPF                                   D+RY L +SFEE++FG ++ IE    ETC +C G+GA+       C  C G G +   QR P   +  V+TC  C G+G +I   CR C G G V+  R + V +PPGV N + ++
Sbjct:   29 LARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYDRFGHAGPT--------AAPGFDPFSSADPFSSIFETFFGGTMRG------SQRGPQRGADLRYTLSISFEEAVFGVEKTIEFRRLETCPACRGSGAEPGTEPVRCPKCGGLGEI--RQRAPLFNMVTVTTCDMCRGEGTVIAIPCRECRGEGRVRQTRKITVRVPPGVDNSSQIR 226          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_DICT6 (Chaperone protein dnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.397e-36
Identity = 80/217 (36.87%), Postives = 114/217 (52.53%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDP--FELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXL-----DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L+ QYHPD+NK P A EKFKEI+ AYEVLSD +KR+ YD+FG  G   ++ G  +   G  P  F+                 ++                    D+RYD++++ EE+ FG ++ I V+  ETC +C G G +       C  C G G +   ++TPFG   Q++TC KC G G+III+ C  C G G+V+ KR ++  IP GV  G
Sbjct:   29 LVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQKRAQYDQFGHVG---DFSGYGDFQGGWQPGGFDFGDLGRNFEDIFENFFGDSIFGDLFGRRREREKAPRKGADLRYDINITLEEAAFGSEKEIYVTRLETCPTCKGKGTEPGTNPVKCDMCNGTGQIRNMRQTPFGQFVQITTCPKCHGTGQIIINPCHECHGTGKVRRKRRVEFKIPAGVDEG 242          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.397e-36
Identity = 85/216 (39.35%), Postives = 114/216 (52.78%), Query Frame = 1
Query:   49 LIMQYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGV-----DPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  +YHPD+NK  P A EKFKEI+ AYEVLSD EKR+ YD+FG AG+ G + G      G      D F  +               +A               DI   L L+ EE++FGG++ + V+  ETC  C G GA+    I +C  C GRG + +  +T FG + +   CS C G+GKI    CR CGG+G V+  RS+ V IPPG+ +G
Sbjct:   27 LARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARYDQFGHAGVDGNFAGQGGFGGGAGINFEDIFSGFGGFGDLFDMVFGSGRKARQGPVPGD-------DIEAVLELTLEEAVFGGEKELRVTRTETCGHCHGNGAEPGTPIITCPTCQGRGQIHQEVKTLFGRMVRSQVCSTCRGEGKIPKTPCRECGGSGLVRKTRSITVKIPPGIDHG 235          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSCS (Chaperone protein dnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.648e-35
Identity = 85/214 (39.72%), Postives = 110/214 (51.40%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPD+NK+P AE KFKEI+ AYEVLSD EKRS+YDRFG AG T         + G DPF                                   D+RY L +SFEE+IFG ++ IE    ETC +C G+GA+       C  C G G +   QR P   +  V+TC  C G+G +I   CR C G G ++  R + V +PPGV + A ++
Sbjct:   29 LARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYDRFGHAGPT--------AAPGFDPFASADPFSSIFETFFGGTMRG------TQRGPQRGADLRYTLSISFEEAIFGVEKTIEYRRMETCPACRGSGAEPGTEPVRCPKCGGLGEI--RQRAPLFNMVTVTTCDMCRGEGTVIAIPCRECRGEGRIRQTRKITVRVPPGVDSSAQIR 226          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.648e-35
Identity = 84/220 (38.18%), Postives = 118/220 (53.64%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL-----SNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGL-ISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L ++YHPD NK PGAEEKFKEIS AY VLSD EKR+ YDRFG AGI G+Y        ++ S   D FE++                                D++YDL+++FEE+ FG ++ I+V   E C +C GTGA+     + C  C G G + +T RT  G+     +TCS C G G++I   C  C G G V++ R + V +P G  +G +++
Sbjct:   29 LALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQYDRFGHAGINGQYTAEDIFRGADFSGFGDIFEMFFGGSRRGPRGPRRGS-----------------DLQYDLYITFEEAAFGVRKDIDVPRTERCSNCSGTGARPGTSPKRCPTCGGTGQI-RTTRTGLGMQFVSTTTCSTCRGKGQVIESPCPVCSGTGRVRNTRKITVNVPAGADSGMSLR 230          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_OCEIH (Chaperone protein dnaJ OS=Oceanobacillus iheyensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.811e-35
Identity = 77/210 (36.67%), Postives = 108/210 (51.43%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  +YHPD+NK   A EKFKE+  AYEVLSDD+KR+ YD+FG +G   +  G      G   F  +               +                D++Y + L FEE++FG +  IE+   E+CD+C G+GAK     ++C  C G G + + Q TPFG +     C+ C G GKII D C  CGG+G VQ  + + + IP G+  G
Sbjct:   28 LARKYHPDVNKEADAAEKFKEVKEAYEVLSDDQKRAQYDQFGHSGPQSQ--GFGGFGGGAQDFGGFGDIFDMFFGGGGRSRDPNAPQQGN--------DLQYTMILDFEEAVFGKETDIEIPKEESCDTCNGSGAKPGTKPETCSHCHGSGQLNQEQNTPFGRVVNRRVCNYCQGTGKIIPDKCNTCGGSGTVQKNKKIHISIPAGIDEG 227          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_BACWK (Chaperone protein dnaJ OS=Bacillus weihenstephanensis (strain KBAB4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.811e-35
Identity = 76/210 (36.19%), Postives = 111/210 (52.86%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  +YHPD++K   A EKFKE+  AYEVLSDD+KR+ YD+FG AG    + G  +   G    +++S+                              D++Y + L FEE+IFG +  +E+   + CD+C G+GAK     ++CK C G G V   Q TPFG I     C  C G G++I + C  C G+G+V+ ++ + V IP G+ NG
Sbjct:   28 LAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGDFGGGFGFEDIFSSFFG-----------GGGGRRRDPNAPRQGADLQYQVTLEFEEAIFGKELNVEIPVEDPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQMIKEKCTTCHGSGKVRKRKKINVKIPAGIDNG 226          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHK (Chaperone protein dnaJ OS=Bacillus thuringiensis subsp. konkukian GN=dnaJ PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.811e-35
Identity = 78/213 (36.62%), Postives = 113/213 (53.05%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT---GEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  +YHPD++K   A EKFKE+  AYEVLSDD+KR+ YD+FG AG     G + G  +   G    +++S+                              D++Y + L FEE+IFG +  +E+   + CD+C G+GAK     ++CK C G G V   Q TPFG I     CS C G G++I + C  C G+G+V+ ++ + V IP G+ NG
Sbjct:   28 LAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFG-----------GGGGRRRDPNAPRQGADLQYQVTLEFEEAIFGKELNVEIPVEDPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSGKVRKRKKINVKIPAGIDNG 229          
The following BLAST results are available for this feature:
BLAST of FC873460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LYSSC5.664e-3639.07Chaperone protein dnaJ OS=Lysinibacillus sphaericu... [more]
DNAJ_BACSH5.664e-3639.07Chaperone protein dnaJ OS=Bacillus sphaericus GN=d... [more]
DNAJ_ROSS17.397e-3639.72Chaperone protein dnaJ OS=Roseiflexus sp. (strain ... [more]
DNAJ_DICT67.397e-3636.87Chaperone protein dnaJ OS=Dictyoglomus thermophilu... [more]
DNAJ_CARHZ7.397e-3639.35Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]
DNAJ_ROSCS1.648e-3539.72Chaperone protein dnaJ OS=Roseiflexus castenholzii... [more]
DNAJ_METTE1.648e-3538.18Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]
DNAJ_OCEIH2.811e-3536.67Chaperone protein dnaJ OS=Oceanobacillus iheyensis... [more]
DNAJ_BACWK2.811e-3536.19Chaperone protein dnaJ OS=Bacillus weihenstephanen... [more]
DNAJ_BACHK2.811e-3536.62Chaperone protein dnaJ OS=Bacillus thuringiensis s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873460 ID=FC873460; Name=FC873460; organism=Citrus clementina; type=EST; length=691bp
TAACGGCACCAGCTATAATCTTTTTGATTTTGTTAATGTCTTCTTGTTTT
GATTATGCAGTATCATCCGGATATCAACAAGAGTCCTGGAGCTGAAGAGA
AGTTCAAAGAGATAAGTTCTGCGTATGAGGTCCTTTCAGATGATGAGAAA
AGATCTGTATATGATCGCTTTGGTGAGGCAGGTATAACTGGAGAATATGA
TGGATTGAGCAACACTTCACAGGGGGTGGATCCTTTTGAATTATATAGTG
CATTCTTTGGTGGTTCAGATGGGCTCTTTGGAGGAGTGGGTGAGGCCGGA
GGCATTAACTTCAATTTTGGAAACAAAGGAAATTTTGGTCTTGACATTCG
GTATGACCTGCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGTG
GGATTGAAGTTTCTTGTTTTGAAACATGTGATAGTTGTGGTGGAACTGGT
GCCAAATCTAGTAATTGCATACAATCATGTAAAGCTTGTTGGGGTAGAGG
AGGAGTACTGAAAACTCAGAGAACACCATTTGGATTAATCTCACAGGTAT
CTACATGCTCTAAGTGTGGTGGTGATGGTAAGATAATAATTGATCATTGC
CGAAGATGTGGTGGTAATGGTGAAGTACAGTCAAAAAGAAGTATGAAAGT
GGTTATCCCACCTGGTGTTAGTAACGGAGCCACCATGCAAA
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