FC873460

Overview
NameFC873460
Unique NameFC873460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10158 contig Ccv1_Contig10158:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_SILST (Chaperone protein dnaJ OS=Silicibacter sp. (strain TM1040) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 70/213 (32.86%), Postives = 97/213 (45.54%), Query Frame = 1
Query:   58 QYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPF-ELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            + HPD N  +P AE +FKE + AY+VL D E+++ YDR+G A       G      G  P  +  SA                              D+RY+L LS EE+  G  + I V    +C SC GTGA+      +C  C G G V   Q    G  +   TC  C G G++I + C+ C G+G V+  RS+ V IP GV  G  ++
Sbjct:   31 ELHPDRNADNPDAEAQFKEANEAYDVLKDPERKAAYDRYGHAAFENGMGGGGGGRAGGHPGGDFSSAFSDVFDDLFGDFMGGGGGRAGARQRATRGADLRYNLRLSLEEAFAGLHKTINVPTSVSCTSCEGTGAEGGAEPTTCPTCSGMGKVRAQQ----GFFTVERTCPTCSGLGQMIKNPCKTCNGHGRVEKDRSLSVNIPAGVETGTRIR 239          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_RICRS (Chaperone protein dnaJ OS=Rickettsia rickettsii (strain Sheila Smith) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 63/216 (29.17%), Postives = 101/216 (46.76%), Query Frame = 1
Query:   43 LVLIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L L  QYHPD   +  AE+KFK I++AY+VL D++KR+ YDR G      +       + G    ++                 +               D++Y+L ++ EE+  G ++ I  S    C++C G+G++    + +C AC G G     Q    G  +    C KC G+G II + C++C G G    +R++ V IP GV NG  ++
Sbjct:   25 LKLAKQYHPDTTDAKDAEKKFKAINAAYDVLKDEQKRAAYDRLGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFSDFMGGSRRSSRPTSAKVRGS----DLKYNLTINLEEAFHGIEKNINFSSAVKCNTCHGSGSEKGETVTTCDACSGVGATRMQQ----GFFTIEQACHKCQGNGHIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIR 232          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMF (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 69/217 (31.80%), Postives = 106/217 (48.85%), Query Frame = 1
Query:   49 LIMQYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFG----EAGITGEYDGLSNT--SQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N  +  AEEKFKE+  AYE LSD EKR++YD++G    E G  G + G      +QG D  +++S              +                D++  + ++ EE+  G ++ I +  +E CD C G+GAK     ++C  C G G V   Q     +     TC  C G GK I + C +C G G  ++ ++++V IP G+ +G
Sbjct:   28 LAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGGSGRAQPDYQGE--------------DVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSGTVHIQQ----AIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVNIPAGIDDG 226          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMB (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup B GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 69/217 (31.80%), Postives = 106/217 (48.85%), Query Frame = 1
Query:   49 LIMQYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFG----EAGITGEYDGLSNT--SQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N  +  AEEKFKE+  AYE LSD EKR++YD++G    E G  G + G      +QG D  +++S              +                D++  + ++ EE+  G ++ I +  +E CD C G+GAK     ++C  C G G V   Q     +     TC  C G GK I + C +C G G  ++ ++++V IP G+ +G
Sbjct:   28 LAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGGSGRAQPDYQGE--------------DVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSGTVHIQQ----AIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVNIPAGIDDG 226          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIMA (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup A GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 69/217 (31.80%), Postives = 106/217 (48.85%), Query Frame = 1
Query:   49 LIMQYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFG----EAGITGEYDGLSNT--SQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N  +  AEEKFKE+  AYE LSD EKR++YD++G    E G  G + G      +QG D  +++S              +                D++  + ++ EE+  G ++ I +  +E CD C G+GAK     ++C  C G G V   Q     +     TC  C G GK I + C +C G G  ++ ++++V IP G+ +G
Sbjct:   28 LAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGGSGRAQPDYQGE--------------DVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSGTVHIQQ----AIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVNIPAGIDDG 226          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIM0 (Chaperone protein dnaJ OS=Neisseria meningitidis serogroup C (strain 053442) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 69/217 (31.80%), Postives = 106/217 (48.85%), Query Frame = 1
Query:   49 LIMQYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFG----EAGITGEYDGLSNT--SQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N  +  AEEKFKE+  AYE LSD EKR++YD++G    E G  G + G      +QG D  +++S              +                D++  + ++ EE+  G ++ I +  +E CD C G+GAK     ++C  C G G V   Q     +     TC  C G GK I + C +C G G  ++ ++++V IP G+ +G
Sbjct:   28 LAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGGSGRAQPDYQGE--------------DVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSGTVHIQQ----AIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVNIPAGIDDG 226          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGE (Chaperone protein dnaJ OS=Mycoplasma genitalium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24
Identity = 70/226 (30.97%), Postives = 104/226 (46.02%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGA------EEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDL------HLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNC-IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 687
            L MQYHPD +K+         EEKFKE++ AYEVLSD+EKR +YD+FG  G+            G +PF+++++                             + + Y+L       ++F E   G  + I+     +C SC G GA+     +  CK C G G V+K QR+ FG I     CS C G GK I   C+ C  N    + +  ++ IP G+ +G  +
Sbjct:   30 LAMQYHPDRHKAENETTQKQNEEKFKEVNEAYEVLSDEEKRKLYDQFGHEGLNAS----GFHEAGFNPFDIFNSVFGEGFSFGMDGDSPFDFIFNRSKKRQQQIVVPYNLDIALVIEINFFEMTNGCNKTIKYERKVSCHSCNGFGAEGGESGLDLCKDCNGNGFVIKNQRSIFGTIQSQVLCSTCNGQGKQIKVKCKTCRSNKYTVTNQIKEINIPAGMYSGEAL 251          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_UREPA (Chaperone protein dnaJ OS=Ureaplasma parvum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 71/215 (33.02%), Postives = 97/215 (45.12%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG-----EYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  ++HPD NKS   +  FKEI+ AYEVLSD +KR+ YD+FG  G  G      + G S    GVD F++                 +               DI   LHL F E++ G  + I      TC  C GTGAK    ++ C  C GRG  ++   + FG I Q   C +C G GK+    C +C G   +  + ++ V IP G   G
Sbjct:   28 LAKEHHPDRNKSAD-DTLFKEINEAYEVLSDSKKRAQYDQFGHDGPQGFSSASGFSGFSGGFGGVD-FDINDIFGSFFNNASSSHNSSNQYETY---------DIHLRLHLDFMEAVNGISKNINYDRKITCHKCQGTGAKDPKDVKICTKCHGRGTSIENVHSLFGTIQQEVECHECEGTGKVASSKCEQCYGKKVINERVNLTVEIPAGTREG 231          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_MESFL (Chaperone protein dnaJ OS=Mesoplasma florum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 69/222 (31.08%), Postives = 104/222 (46.85%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA-----------GITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL-KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  +YHPD+NK  GAEEKFKE++ A  VL D +K++ YD+FG A           G  G  D  SN   G+D  +++S                               DI  +  L+F+E +FG  +   ++  +TC  C G GA++ + +  C  C G G ++   Q  PF + +QV TC KC G GK     C+ C G G    +  +++ +P G+  G
Sbjct:   28 LAKKYHPDMNKESGAEEKFKEVNEAASVLLDADKKAKYDQFGHAAFDGSSGFGGSGFGGFEDFFSNMGGGMDFGDIFSDLFG-----------GGRSGRSSRRGPSKGQDIGLEATLTFKELVFGVNKKTILNLVKTCTKCDGVGAENPSDVHICTKCNGAGQIIVNKQMGPFQVQNQV-TCDKCNGVGKEFKSKCKNCHGKGVESKREEVEIPLPKGLWPG 237          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRCR (Chaperone protein dnaJ OS=Ehrlichia chaffeensis (strain Arkansas) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 66/215 (30.70%), Postives = 106/215 (49.30%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGV--DPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            + ++YHPD  K+PG   AEEKFKE+S AY+VL D +KR+ YD++G         G  + + G   D  ++++                               D+R+D+ ++ E+S  G +  I    +  C SC G+G++ S     C  C G G V    RT  G  +   TC  C G+G+II + C++C G+G V+ + ++ V IP G+ +G
Sbjct:   28 MALKYHPD--KNPGNKEAEEKFKELSEAYDVLIDQDKRAAYDKYGHNAFDSSGRGGFDFNSGFSGDFSDIFN-------DLFGGGFRGGRGSSRRHDSGAVGSDLRFDIEITLEDSFNGKKVPISYVTYVKCSSCSGSGSEGSAKSVQCSTCHGVGNV----RTQQGFFTIERTCHVCNGEGEIIQNKCKKCSGSGRVRDEVNLLVTIPKGIESG 229          
The following BLAST results are available for this feature:
BLAST of FC873460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SILST4.973e-2432.86Chaperone protein dnaJ OS=Silicibacter sp. (strain... [more]
DNAJ_RICRS4.973e-2429.17Chaperone protein dnaJ OS=Rickettsia rickettsii (s... [more]
DNAJ_NEIMF4.973e-2431.80Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIMB4.973e-2431.80Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIMA4.973e-2431.80Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_NEIM04.973e-2431.80Chaperone protein dnaJ OS=Neisseria meningitidis s... [more]
DNAJ_MYCGE6.495e-2430.97Chaperone protein dnaJ OS=Mycoplasma genitalium GN... [more]
DNAJ_UREPA8.483e-2433.02Chaperone protein dnaJ OS=Ureaplasma parvum GN=dna... [more]
DNAJ_MESFL8.483e-2431.08Chaperone protein dnaJ OS=Mesoplasma florum GN=dna... [more]
DNAJ_EHRCR8.483e-2430.70Chaperone protein dnaJ OS=Ehrlichia chaffeensis (s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873460 ID=FC873460; Name=FC873460; organism=Citrus clementina; type=EST; length=691bp
TAACGGCACCAGCTATAATCTTTTTGATTTTGTTAATGTCTTCTTGTTTT
GATTATGCAGTATCATCCGGATATCAACAAGAGTCCTGGAGCTGAAGAGA
AGTTCAAAGAGATAAGTTCTGCGTATGAGGTCCTTTCAGATGATGAGAAA
AGATCTGTATATGATCGCTTTGGTGAGGCAGGTATAACTGGAGAATATGA
TGGATTGAGCAACACTTCACAGGGGGTGGATCCTTTTGAATTATATAGTG
CATTCTTTGGTGGTTCAGATGGGCTCTTTGGAGGAGTGGGTGAGGCCGGA
GGCATTAACTTCAATTTTGGAAACAAAGGAAATTTTGGTCTTGACATTCG
GTATGACCTGCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGTG
GGATTGAAGTTTCTTGTTTTGAAACATGTGATAGTTGTGGTGGAACTGGT
GCCAAATCTAGTAATTGCATACAATCATGTAAAGCTTGTTGGGGTAGAGG
AGGAGTACTGAAAACTCAGAGAACACCATTTGGATTAATCTCACAGGTAT
CTACATGCTCTAAGTGTGGTGGTGATGGTAAGATAATAATTGATCATTGC
CGAAGATGTGGTGGTAATGGTGAAGTACAGTCAAAAAGAAGTATGAAAGT
GGTTATCCCACCTGGTGTTAGTAACGGAGCCACCATGCAAA
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