FC873460

Overview
NameFC873460
Unique NameFC873460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10158 contig Ccv1_Contig10158:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LACSK (Chaperone protein dnaJ OS=Lactobacillus sakei GN=dnaJ PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.042e-34
Identity = 75/214 (35.05%), Postives = 107/214 (50.00%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK+P AE KFKE++ AYE LSD +KR+ YD++G AG+ G + G +   QG   F                                   D++Y + L FEE++FG +  I  S    C +C G+GAK     ++C  C G G +   ++TP G +    TC  CGG GK I   C  C G G  + + ++KV +P GV +G  M+
Sbjct:   29 LSKKYHPDINKAPDAEAKFKEVTEAYEALSDPQKRAAYDQYGHAGMNGGFGGGAGAGQGFGGFG--GGAEGFGGFDDIFSSFFGGGARQQPNGPRQGSDLQYRMDLKFEEAVFGKETKISYSREAECHTCHGSGAKPGTSAETCHKCHGAGQIQVERQTPLGRMMSRETCDVCGGTGKEIKSKCDTCHGTGREEERHTVKVKVPAGVEDGQQMR 240          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLM (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.042e-34
Identity = 76/223 (34.08%), Postives = 116/223 (52.02%), Query Frame = 1
Query:   58 QYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY-----------DGLSNTSQGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            +YHPD+NK  GAE+K+KE+  AYE LSD++KR+ YD++GEAG  G +            G    S G   FE ++S+                              D++Y ++L FEE+IFG ++ ++ +  E C +CGG+GAK+    ++C  C GRG +   + TP G +   +TC  C G GK I + C  C G+G  +   ++KV +P GV  G  M+
Sbjct:   31 KYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGANGGFGGGGFGGASGFSGFGGASGGFGGFEDIFSSFFGGGGAQVNPNAPRQGD------------DLQYRINLKFEEAIFGVEKQVKYNREELCHTCGGSGAKAGTHPETCHKCGGRGQINVVRDTPLGRMQTQTTCDVCHGTGKEIKEKCTTCHGSGHEKVAHTVKVTVPAGVETGQKMR 241          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTH (Chaperone protein dnaJ OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.181e-33
Identity = 85/228 (37.28%), Postives = 112/228 (49.12%), Query Frame = 1
Query:   49 LIMQYHPDINKSP-GAEEKFKEISSAYEVLSDDEKRSVYDRFGEA--------------GITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 687
            L  QYHPD+N     AE KFKEI+ AYEVLSD +KR+ YD+FG +              G TG +        G D FE +                                D++Y + +SFEE+ FG ++ + VS  E C +C G+G K  +   +C+ C G G V   QRTPFG I  V TC  C G+GKII + C  CGG G V+    +KV IP G+ NG T+
Sbjct:   29 LAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKRARYDQFGHSAFDPNGFGGGGFGGGFTGGFGDFDFGGFG-DIFEAFFGSGFGTRTSSARRGPQKGA------------DLKYSMEVSFEEAAFGTEKEVTVSRLEICPTCSGSGTKPGHQPVTCRQCNGTGQVQYKQRTPFGQIVNVRTCDVCHGEGKIITNPCETCGGKGRVRKHTKLKVRIPAGIDNGETI 243          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMF (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.542e-33
Identity = 77/214 (35.98%), Postives = 105/214 (49.07%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPDINK  GA+EKFKEIS AYE LSD +KR+ YD++G       + G +        F  +               +                D++Y + L F+E+IFG    IE+   E CD+C G+GAK     + C  C G+G +   Q TPFG +    TC  C G GK I + C  C G G V   + +KV +P GV++G  M+
Sbjct:   28 LSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFGGGGRQQDPNAPRQGS--------DLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTGKEIKEKCPTCHGKGRVTKTKKIKVKVPAGVNDGQQMR 233          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMC (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.542e-33
Identity = 77/214 (35.98%), Postives = 105/214 (49.07%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPDINK  GA+EKFKEIS AYE LSD +KR+ YD++G       + G +        F  +               +                D++Y + L F+E+IFG    IE+   E CD+C G+GAK     + C  C G+G +   Q TPFG +    TC  C G GK I + C  C G G V   + +KV +P GV++G  M+
Sbjct:   28 LSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFGGGGRQQDPNAPRQGS--------DLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTGKEIKEKCPTCHGKGRVTKTKKIKVKVPAGVNDGQQMR 233          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMO (Chaperone protein dnaJ OS=Listeria monocytogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.014e-33
Identity = 81/218 (37.16%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA----GITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPDINK  GA+EKFKEIS AYE LSD +KR+ YD++G      G  G   G      G   FE                                  D++Y + L F+E+IFG    IE+   E CD+C G+GAK     + C  C G+G +   Q TPFG +    TC  C G GK I + C  C G G V   + +KV +P GV++G  M+
Sbjct:   28 LSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGGAGGGFGGGGFSGFE-----------DIFDTFFGGGGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTGKEIKEKCPTCHGKGRVTKTKKIKVKVPAGVNDGQQMR 234          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTFA (Chaperone protein dnaJ OS=Enterococcus faecalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.014e-33
Identity = 76/214 (35.51%), Postives = 108/214 (50.47%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK   AEEKFKE+S AYEVLSD +K++ YD++G AG    Y G +    G       S+                              D++Y + L FEE+IFG ++ I+ +  +TC +CGG GAK     ++C  C G G +   ++TP G +    TC  C G GK I + C  C G G  +   ++KV +P GV +G  M+
Sbjct:   29 LSKKYHPDINKEADAEEKFKEVSEAYEVLSDPQKKAAYDQYGHAGTDPNYGGGAGGFGGFGGGGFSSSGFGGFEDIFDSFFGGGGGRSVDPNAPRQGADLQYTIQLKFEEAIFGVEKEIKYNREDTCATCGGNGAKPGTHPETCHKCHGSGTINVERQTPLGRMMSRQTCDVCHGTGKEIKEPCPTCHGTGHEKKAHTVKVNVPAGVEDGQQMR 242          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOCE (Chaperone protein dnaJ OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.014e-33
Identity = 85/223 (38.12%), Postives = 112/223 (50.22%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT----GEYDGLSNTSQ--GV-DPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 687
            L  +YHPD+N  PG   AE KFKE++ AYE+LSD +KRS YD+FG AG      G   G S      G+ D FE +                                DI+Y   +SFEE+ FG +R I VS  E C  C G+GAK  + + +C  C G G V   Q TPFG      TC  C G+GKII + C  C G G ++S + +K+ IP G+ +G T+
Sbjct:   29 LAKKYHPDVN--PGDTTAEAKFKEVNEAYEILSDSQKRSRYDQFGHAGTDPNGFGGAGGFSTDFDFGGIGDIFETFFGG------------SGFGGRSKTRRGPQKGADIKYSTEISFEEAAFGVEREINVSKMEVCSKCTGSGAKPGSNVTTCNHCNGTGQVQIKQNTPFGQFINTKTCDACKGEGKIITEPCPACNGKGRLRSTKKIKIDIPAGIDDGQTI 237          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.436e-33
Identity = 84/216 (38.89%), Postives = 111/216 (51.39%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE--YDGLSNTS-QGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N  PG   AEEKFKEI+ AYEVLSDD KR  YD+FG  G+ G+  + G      QG   FE                  +               DIR  + +SFEE+ FG +  I+V+  E C+ C GTGAK     ++C  C G G V   QRTPFG I+    CS C G G++I   C +C G G  +  ++++V IP G+ +G
Sbjct:   29 LAMKYHPDRN--PGDKEAEEKFKEINEAYEVLSDDTKRKTYDQFGHDGLNGQGGFGGQGGFGGQGFGGFE-----DMFGDIFGDMFGGSFGGGRARRRGPQRGADIRQSVTISFEEAAFGKKMSIKVNRSEECEECNGTGAKPGTSKKTCSTCNGTGQVRTVQRTPFGNIASSRPCSACNGTGEVIESPCSKCHGTGNTRKVKTIEVDIPAGIDDG 237          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_PEDPA (Chaperone protein dnaJ OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.487e-33
Identity = 77/214 (35.98%), Postives = 107/214 (50.00%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK+P AE+KFK+++ AYEVL D +KR+ YD+FG A     + G     QG   F  +               +                D++Y + L FEE+IFG +  I+ S    C +CGG+GAK      +C  C G G +  TQ TP G + +  TC  C G GK I + C  CGG G    +  +KV +P GV +G  M+
Sbjct:   29 LSKKYHPDINKAPDAEQKFKDVNEAYEVLGDSQKRAQYDQFGSADPNAGFGGGGFGGQG--GFSDFGGGFEDIFGSFFGGGQRQSPNQPRQGE-----DLQYQMSLKFEEAIFGKKTTIKYSREALCKTCGGSGAKEGTSPVTCHKCNGTGTIQVTQNTPLGRMVRQQTCDVCNGTGKEIKEKCPTCGGTGHTSQQHEVKVSVPAGVEDGQQMR 235          
The following BLAST results are available for this feature:
BLAST of FC873460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LACSK9.042e-3435.05Chaperone protein dnaJ OS=Lactobacillus sakei GN=d... [more]
DNAJ_LACLM9.042e-3434.08Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_CLOTH1.181e-3337.28Chaperone protein dnaJ OS=Clostridium thermocellum... [more]
DNAJ_LISMF1.542e-3335.98Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISMC1.542e-3335.98Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISMO2.014e-3337.16Chaperone protein dnaJ OS=Listeria monocytogenes G... [more]
DNAJ_ENTFA2.014e-3335.51Chaperone protein dnaJ OS=Enterococcus faecalis GN... [more]
DNAJ_CLOCE2.014e-3338.12Chaperone protein dnaJ OS=Clostridium cellulolytic... [more]
DNAJ_CLOD63.436e-3338.89Chaperone protein dnaJ OS=Clostridium difficile (s... [more]
DNAJ_PEDPA4.487e-3335.98Chaperone protein dnaJ OS=Pediococcus pentosaceus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873460 ID=FC873460; Name=FC873460; organism=Citrus clementina; type=EST; length=691bp
TAACGGCACCAGCTATAATCTTTTTGATTTTGTTAATGTCTTCTTGTTTT
GATTATGCAGTATCATCCGGATATCAACAAGAGTCCTGGAGCTGAAGAGA
AGTTCAAAGAGATAAGTTCTGCGTATGAGGTCCTTTCAGATGATGAGAAA
AGATCTGTATATGATCGCTTTGGTGAGGCAGGTATAACTGGAGAATATGA
TGGATTGAGCAACACTTCACAGGGGGTGGATCCTTTTGAATTATATAGTG
CATTCTTTGGTGGTTCAGATGGGCTCTTTGGAGGAGTGGGTGAGGCCGGA
GGCATTAACTTCAATTTTGGAAACAAAGGAAATTTTGGTCTTGACATTCG
GTATGACCTGCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGTG
GGATTGAAGTTTCTTGTTTTGAAACATGTGATAGTTGTGGTGGAACTGGT
GCCAAATCTAGTAATTGCATACAATCATGTAAAGCTTGTTGGGGTAGAGG
AGGAGTACTGAAAACTCAGAGAACACCATTTGGATTAATCTCACAGGTAT
CTACATGCTCTAAGTGTGGTGGTGATGGTAAGATAATAATTGATCATTGC
CGAAGATGTGGTGGTAATGGTGAAGTACAGTCAAAAAGAAGTATGAAAGT
GGTTATCCCACCTGGTGTTAGTAACGGAGCCACCATGCAAA
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