FC873460

Overview
NameFC873460
Unique NameFC873460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10158 contig Ccv1_Contig10158:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHD (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.306e-32
Identity = 80/227 (35.24%), Postives = 111/227 (48.90%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEA----------GITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPD+N  PG   AEEKFKE + AY+VLSD EKR+ YD+ G +          G  G++ G        D F+++                                D+RYDL ++FEE+ FG ++ I+V   ETC  C G+G+       +C  C G G V  TQRTPFG I    TC  C G G+ I   C+ C G G  +  +++KV +PPG  +G  ++
Sbjct:   27 LARQYHPDVN--PGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSAFDPNQQGFGGFGGDFGGFG------DIFDMFFGGGGGGGQRRQGPTRGN--------------DLRYDLTITFEEAAFGTEKEIQVPRQETCTECHGSGSAPGTHPTTCSQCHGTGQVKATQRTPFGAIQTARTCPACNGSGQFISSPCKECSGKGTTRKVKTIKVTVPPGSEDGLNLR 231          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLC (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.909e-32
Identity = 75/223 (33.63%), Postives = 115/223 (51.57%), Query Frame = 1
Query:   58 QYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY-----------DGLSNTSQGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            +YHPD+NK  GAE+K+KE+  AYE LSD++KR+ YD++GEAG  G +            G    S G   FE ++S+                              D++Y ++L FEE+IFG ++ ++ +  E C +CGG+GAK+    ++C  C GRG +   + TP G +   +TC  C G GK I +    C G+G  +   ++KV +P GV  G  M+
Sbjct:   31 KYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGRNGGFGGGGFGGASGFSGFGGRSGGFGGFEDIFSSFFGGGGAQVNPNAPRQGD------------DLQYRINLKFEEAIFGVEKQVKYNREELCHTCGGSGAKAGTHPETCHKCGGRGQINVVRDTPLGRMQTQTTCDVCHGTGKEIKEKSTTCHGSGHEKVAHTVKVTVPAGVETGQKMR 241          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CLONN (Chaperone protein dnaJ OS=Clostridium novyi (strain NT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.799e-32
Identity = 78/217 (35.94%), Postives = 110/217 (50.69%), Query Frame = 1
Query:   49 LIMQYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY------DGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N+ +  AEEKFK+I+ AY+VLSD +K++ YD+FG A   G         G S      D F+ +                A               D+ Y + L+FEE++FG ++ I ++  E CD+C G+GAK     ++C  C G G V   + TP G     STC KCGG GK+I + C  C G G V+  + +K+ IP GV  G
Sbjct:   28 LAMKYHPDRNQGNKEAEEKFKDINEAYQVLSDPQKKANYDQFGSADFNGGGFGGFGGGGFSGMGGFEDIFDSFFGGGFSSRRRNGPERGA---------------DLEYTVSLTFEEAVFGVEKEISITRNEKCDTCAGSGAKPGTDSKTCDKCGGTGQVRVQRNTPLGSFVSTSTCDKCGGSGKVIDEPCTTCHGKGTVRKNKKIKINIPAGVDTG 229          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOBA (Chaperone protein dnaJ OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.799e-32
Identity = 82/214 (38.32%), Postives = 108/214 (50.47%), Query Frame = 1
Query:   49 LIMQYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 687
            L ++YHPD NK +  AEEKFKEI+ AY+VLSD EK+S YD+FG A   G   G    S G   F++                                 DI Y L L+FEE++FG ++ I V+  E+C+ C G+GA+     ++C  C G G V   ++TP G     STC +C G G II   C  C GNG V+  R + V IP GV  G  M
Sbjct:   28 LAIKYHPDKNKGNTEAEEKFKEINEAYQVLSDPEKKSNYDQFGSADFNGGGFG----SGGFGGFDM------GGFGDIFDMFTGGGSSTRRRNGPVNGNDIEYTLTLTFEEAVFGVEKEITVNRSESCEHCNGSGAEPGTSKKTCPTCSGTGQVRVQRQTPLGSFVSTSTCDRCSGTGNIIEKPCTHCRGNGNVRKTRKINVNIPAGVDTGNVM 231          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIF5 (Chaperone protein dnaJ OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.962e-32
Identity = 77/211 (36.49%), Postives = 103/211 (48.82%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG-AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N     AEE+FKEIS+AYEVLSD +KR  YDRFG AG+ G   G         P   +               E                D+RY+L L+ EE+  G +  I++    TC+ C G+GAK  + ++ C  C GRG V   Q    G  S    C +C G GK+I + C  C G+G V+  R ++V +P GV  G
Sbjct:   28 LAMRYHPDRNPDDASAEERFKEISAAYEVLSDPQKRQAYDRFGHAGVNGGGGG---------PGAGFGGGGGGFGDVFSDLFEQAFGGGFRGQDSGRGADLRYELELTLEEAALGKEVTIQIPSSATCEVCRGSGAKPGSAVEDCATCGGRGQVRMVQ----GFFSVTRPCPQCNGSGKVIKEPCTNCHGHGRVRRNRDLQVKVPAGVDTG 225          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIF2 (Chaperone protein dnaJ OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.962e-32
Identity = 77/211 (36.49%), Postives = 103/211 (48.82%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG-AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N     AEE+FKEIS+AYEVLSD +KR  YDRFG AG+ G   G         P   +               E                D+RY+L L+ EE+  G +  I++    TC+ C G+GAK  + ++ C  C GRG V   Q    G  S    C +C G GK+I + C  C G+G V+  R ++V +P GV  G
Sbjct:   28 LAMRYHPDRNPDDASAEERFKEISAAYEVLSDPQKRQAYDRFGHAGVNGGGGG---------PGAGFGGGGGGFGDVFSDLFEQAFGGGFRGQDSGRGADLRYELELTLEEAALGKEVTIQIPSSATCEVCRGSGAKPGSAVEDCATCGGRGQVRMVQ----GFFSVTRPCPQCNGSGKVIKEPCTNCHGHGRVRRNRDLQVKVPAGVDTG 225          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATW (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.480e-32
Identity = 83/213 (38.97%), Postives = 111/213 (52.11%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N  PG   AE KFKEIS AYE+LSDD KRS YD+FG AG+  +  G   T    D F+ +                                D+ Y L ++ EE+ FG ++ I +   E+CDSC GTG+KS +   +C AC G+G + + Q    G  +   TC  C G G  I D C  C GNG+V+ ++++KV IP GV NG
Sbjct:   28 LAMEYHPDRN--PGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVN-QQSGFGGTGGFEDIFDTFFGGGTSRGSNRSRASRGS--------------DLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKT-TCHACHGQGTIRRQQ----GFFAFEQTCPVCNGTGYSITDPCDACYGNGKVKKQKTLKVKIPEGVDNG 218          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LACPL (Chaperone protein dnaJ OS=Lactobacillus plantarum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 74/214 (34.58%), Postives = 101/214 (47.20%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+N  PGAEEKFK ++ AYE L D +KR+ YD+FG  G    + G      G D                     A               D++Y++ L FE++IFG +  I  +  E C++CGG+GAK      +C  C G G +     TP G +     C  C G GK I D C  CGG+G  +   S+KV +P GV  G  M+
Sbjct:   28 LSKKYHPDLNHEPGAEEKFKAVNEAYETLGDAQKRAQYDQFGSTGGQQGFGGAGGFG-GQDFGGFGGGGGFEDIFSSFFGGGAGGSRRSNPTAPQQGRDLQYEMTLKFEDAIFGKKTTITYNREEQCETCGGSGAKPGTSPVTCSKCHGAGYIQVQTNTPLGRMMSQQVCDVCHGTGKEIKDKCATCGGSGHTEQSHSIKVTVPAGVEEGQQMR 240          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 83/213 (38.97%), Postives = 111/213 (52.11%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N  PG   AE KFKEIS AYE+LSDD KRS YD+FG AG+  +  G   T    D F+ +                                D+ Y L ++ EE+ FG ++ I +   E+CDSC GTG+KS +   +C AC G+G + + Q    G  +   TC  C G G  I D C  C GNG+V+ ++++KV IP GV NG
Sbjct:   28 LAMKYHPDRN--PGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVN-QQSGFGGTGGFEDIFDTFFGGGTSRGSNRSRASRGS--------------DLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKT-TCHACHGQGTIRRQQ----GFFAFEQTCPVCNGTGYSITDPCDACYGNGKVKKQKTLKVKIPEGVDNG 218          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATH (Chaperone protein dnaJ OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 83/213 (38.97%), Postives = 111/213 (52.11%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N  PG   AE KFKEIS AYE+LSDD KRS YD+FG AG+  +  G   T    D F+ +                                D+ Y L ++ EE+ FG ++ I +   E+CDSC GTG+KS +   +C AC G+G + + Q    G  +   TC  C G G  I D C  C GNG+V+ ++++KV IP GV NG
Sbjct:   28 LAMKYHPDRN--PGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVN-QQSGFGGTGGFEDIFDTFFGGGTSRGSNRSRASRGS--------------DLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKT-TCHACHGQGTIRRQQ----GFFAFEQTCPVCNGTGYSITDPCDACYGNGKVKKQKTLKVKIPEGVDNG 218          
The following BLAST results are available for this feature:
BLAST of FC873460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_DESHD1.306e-3235.24Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_LACLC2.909e-3233.63Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_CLONN3.799e-3235.94Chaperone protein dnaJ OS=Clostridium novyi (strai... [more]
DNAJ_CLOBA3.799e-3238.32Chaperone protein dnaJ OS=Clostridium botulinum (s... [more]
DNAJ_ACIF54.962e-3236.49Chaperone protein dnaJ OS=Acidithiobacillus ferroo... [more]
DNAJ_ACIF24.962e-3236.49Chaperone protein dnaJ OS=Acidithiobacillus ferroo... [more]
DNAJ_FRATW6.480e-3238.97Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_LACPL8.463e-3234.58Chaperone protein dnaJ OS=Lactobacillus plantarum ... [more]
DNAJ_FRATU8.463e-3238.97Chaperone protein dnaJ OS=Francisella tularensis G... [more]
DNAJ_FRATH8.463e-3238.97Chaperone protein dnaJ OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873460 ID=FC873460; Name=FC873460; organism=Citrus clementina; type=EST; length=691bp
TAACGGCACCAGCTATAATCTTTTTGATTTTGTTAATGTCTTCTTGTTTT
GATTATGCAGTATCATCCGGATATCAACAAGAGTCCTGGAGCTGAAGAGA
AGTTCAAAGAGATAAGTTCTGCGTATGAGGTCCTTTCAGATGATGAGAAA
AGATCTGTATATGATCGCTTTGGTGAGGCAGGTATAACTGGAGAATATGA
TGGATTGAGCAACACTTCACAGGGGGTGGATCCTTTTGAATTATATAGTG
CATTCTTTGGTGGTTCAGATGGGCTCTTTGGAGGAGTGGGTGAGGCCGGA
GGCATTAACTTCAATTTTGGAAACAAAGGAAATTTTGGTCTTGACATTCG
GTATGACCTGCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGTG
GGATTGAAGTTTCTTGTTTTGAAACATGTGATAGTTGTGGTGGAACTGGT
GCCAAATCTAGTAATTGCATACAATCATGTAAAGCTTGTTGGGGTAGAGG
AGGAGTACTGAAAACTCAGAGAACACCATTTGGATTAATCTCACAGGTAT
CTACATGCTCTAAGTGTGGTGGTGATGGTAAGATAATAATTGATCATTGC
CGAAGATGTGGTGGTAATGGTGAAGTACAGTCAAAAAGAAGTATGAAAGT
GGTTATCCCACCTGGTGTTAGTAACGGAGCCACCATGCAAA
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