FC873466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_SYNS9 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9902) GN=groL1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.547e-19 Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 307 AL PL IA+NAG NG+VV+E V S N++ GYNAA G+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 446 ALTAPLMRIAENAGANGAVVAENVKSRSNNE-GYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGGGMGGGDFDY 544
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_THEVL (60 kDa chaperonin 2 OS=Thermosynechococcus vulcanus GN=groL2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.446e-19 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 AL P+ IA NAG G+VV E V + D YG+NAATG YEDL++AGIIDP KVVR L++A S+A L ++ +VVE EP+PA PA M G Sbjct: 445 ALAAPVAQIADNAGAEGAVVVENVRAGD-FNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEALVVEKPEPKPAAPANGGMGGMG 540
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_THEEB (60 kDa chaperonin 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=groL2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.446e-19 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 AL P+ IA NAG G+VV E V + D YG+NAATG YEDL++AGIIDP KVVR L++A S+A L ++ +VVE EP+PA PA M G Sbjct: 445 ALAAPVAQIADNAGAEGAVVVENVRAGD-FNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEALVVEKPEPKPAAPANGGMGGMG 540
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_RHORT (60 kDa chaperonin 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.877e-19 Identity = 47/101 (46.53%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 304 +RAL P++ IA+NAGV+G+VV+ K+L + + +GYNA TG YE+L+ AG+IDPTKVVR L+ A+S+A + ++ +V EI E + AMP+ + G G Sbjct: 444 RRALQAPVRQIAENAGVDGAVVAGKLLENSDTDFGYNAQTGIYENLVTAGVIDPTKVVRAALQGAASIAGLLITTEAMVAEIPEKKDAMPSPDMGGMGGMG 544
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 5.877e-19 Identity = 53/99 (53.54%), Postives = 67/99 (67.68%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 KRAL PL+ IA NAGV GSV+ +V SD + GYNAATG +EDL+AAGIIDP KVVR L++A+S+A L ++ +VVE E + A PA M G Sbjct: 443 KRALEAPLRQIADNAGVEGSVIVSRVKDSDFNT-GYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKAAAPADAGMGGMG 540
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_SULMW (60 kDa chaperonin OS=Sulcia muelleri (strain GWSS) GN=groL PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.676e-19 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 304 KR+L PL+ I NAG GSV+ KV N ++GY+A G Y+++++ GIIDPTKV R LE+A+SV+ L ++CV+ EIK+ EPAMP M NSG G Sbjct: 444 KRSLQEPLRQIVANAGEEGSVIVAKVAEGKN-EFGYDAKLGEYKNMISEGIIDPTKVTRVALENAASVSGMLLTTECVITEIKKEEPAMP---QMPNSGMG 540
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_DESOH (60 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groL PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18 Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMDNSGYG 304 RA+ PL+ IA NAGV GSVV EKV ++ +GYNAATG+Y DL+AAG+IDPTKVVR L++A SVA L ++ ++ E KE AMP G G G Sbjct: 444 RAIEEPLRRIANNAGVEGSVVIEKV-KNETGSFGYNAATGDYGDLIAAGVIDPTKVVRFALQNACSVASVMLTTEAMIAEKPSKEEPAAMPGGGMGGMGGMG 544
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_BACFR (60 kDa chaperonin OS=Bacteroides fragilis GN=groL PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18 Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 283 KRA+ PL+ I NAG G+VV +KV S +GYNA T YE++ AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 444 KRAIEEPLRQIVANAGKEGAVVVQKV-SEGKGDFGYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_BACFN (60 kDa chaperonin OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=groL PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18 Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 283 KRA+ PL+ I NAG G+VV +KV S +GYNA T YE++ AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 444 KRAIEEPLRQIVANAGKEGAVVVQKV-SEGKGDFGYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_SYNPW (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH7803) GN=groL2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18 Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 307 AL PL IA+NAGVNG+VV+E V + ++ GYNAA G+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 446 ALTAPLMRIAENAGVNGAVVAENVKAKSFNE-GYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGMGGGDFDY 544 The following BLAST results are available for this feature:
BLAST of FC873466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873466 ID=FC873466; Name=FC873466; organism=Citrus clementina; type=EST; length=584bpback to top |